Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323F04f
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    29   0.061
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   2.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   4.0  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    22   7.0  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    22   7.0  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    22   7.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    22   7.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 29.1 bits (62), Expect = 0.061
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -3

Query: 309 KRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQRMQ 181
           ++Q  +QG+R   P+L + + ++  Q ++   + +RQ QQR Q
Sbjct: 287 QQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQ 329



 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -3

Query: 309 KRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQRMQ 181
           ++Q  +QG+R   P+L     ++ +Q +RP  + ++Q QQ+ Q
Sbjct: 254 QQQQQQQGERYVPPQL----RQQRQQQQRPRQQQQQQQQQQQQ 292


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 300 HSRQGQRDR-GPKLP--KGQMERHRQLKRPPVRHKRQGQQRMQ 181
           HS + +R R GP+    + Q ++H+Q ++   + ++Q QQ+ Q
Sbjct: 206 HSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQ 248


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 303  QHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQ 193
            QH  Q Q  +  +  + Q ++H+Q ++  ++H  Q Q
Sbjct: 1301 QHQYQQQLQQQQQQQQQQQQQHQQHQQHQLQHHHQPQ 1337


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = +2

Query: 179 SCIRCCPCRLCRTGGRFSCLCRSICP 256
           +C+  C C     G    C  R  CP
Sbjct: 5   TCVADCKCTSPNCGAGCGCESRCTCP 30


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 305 GNIAGRGSEIGGRSYQRGR 249
           G   GRG   GGR   RGR
Sbjct: 67  GGRGGRGGRGGGRGRGRGR 85


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = -3

Query: 297 SRQGQRDRGPKLPKGQMERHRQLKRPPVRH----KRQGQQRMQLIRC*CDGSTES 145
           SR+  R+  PK       ++R    PP +H    +R    R +  R  C   +ES
Sbjct: 43  SRKCSRNGSPKFAPAVQSKNRMPPVPPPKHSQRRRRSSSPRTRQFRSVCYYVSES 97


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 288 GQRDRGPKLPKGQMERHRQLKRPP-VRHKRQ 199
           G+   GP +P G  ERHR+ + PP  RH R+
Sbjct: 319 GRLRTGP-VP-GAAERHRRRRPPPRRRHDRR 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,795
Number of Sequences: 2352
Number of extensions: 6481
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)