Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323F03f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0394 - 8081172-8081330,8082015-8082134,8082223-8082271,808...    31   0.74 
11_06_0434 - 23512921-23513529                                         27   9.1  

>03_02_0394 -
           8081172-8081330,8082015-8082134,8082223-8082271,
           8083193-8083371,8083583-8083852,8084480-8084631,
           8085694-8085715,8086314-8086430
          Length = 355

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 359 EFSMSDSTFLYSSTWYLKSSTFSSPTSLERKACKIST 249
           E + ++++ L  S WY+  S  SSP + +R++ K+ST
Sbjct: 41  EVAKAEASSLKKSRWYMIKSNPSSPLTTQRESHKVST 77


>11_06_0434 - 23512921-23513529
          Length = 202

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 52  TNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEAAE 180
           T+DE  D  D E +       D+ +++S+NE  DDE  S+  E
Sbjct: 139 TDDEEDDDDDDEDESEEDDEFDEKEDDSDNE--DDEESSDDEE 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.308    0.128    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,517,167
Number of Sequences: 37544
Number of extensions: 109319
Number of successful extensions: 295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)