Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323F03f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog o...    31   3.2  
BC015953-1|AAH15953.1|  760|Homo sapiens SFRS8 protein protein.        31   3.2  
BC008707-1|AAH08707.1|  760|Homo sapiens SFRS8 protein protein.        31   3.2  
AB208921-1|BAD92158.1|  636|Homo sapiens SFRS8 protein variant p...    31   3.2  
DQ454817-1|ABE66901.1|   94|Homo sapiens immunoglobulin heavy ch...    30   5.7  

>U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog of
           Drosophila splicing regulator
           suppressor-of-white-apricot mRNA, complete cds. ).
          Length = 951

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 22/96 (22%), Positives = 38/96 (39%)
 Frame = +1

Query: 19  IPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEAAESFIXXX 198
           +PDGK  +  F           E DL    PL+KN+   +++  DDE   E  ES     
Sbjct: 566 VPDGKLVKASFAPISFA-IKAKENDL---LPLEKNRVKLDDDSDDDEESKEGQESSSSAA 621

Query: 199 XXXXXXXXXXXIIQDSSVDILQALRSSEVGDEKVED 306
                      ++++    + Q    ++   +K+ED
Sbjct: 622 NTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLED 657


>BC015953-1|AAH15953.1|  760|Homo sapiens SFRS8 protein protein.
          Length = 760

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 22/96 (22%), Positives = 38/96 (39%)
 Frame = +1

Query: 19  IPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEAAESFIXXX 198
           +PDGK  +  F           E DL    PL+KN+   +++  DDE   E  ES     
Sbjct: 566 VPDGKLVKASFAPISFA-IKAKENDL---LPLEKNRVKLDDDSDDDEESKEGQESSSSAA 621

Query: 199 XXXXXXXXXXXIIQDSSVDILQALRSSEVGDEKVED 306
                      ++++    + Q    ++   +K+ED
Sbjct: 622 NTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLED 657


>BC008707-1|AAH08707.1|  760|Homo sapiens SFRS8 protein protein.
          Length = 760

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 22/96 (22%), Positives = 38/96 (39%)
 Frame = +1

Query: 19  IPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEAAESFIXXX 198
           +PDGK  +  F           E DL    PL+KN+   +++  DDE   E  ES     
Sbjct: 566 VPDGKLVKASFAPISFA-IKAKENDL---LPLEKNRVKLDDDSDDDEESKEGQESSSSAA 621

Query: 199 XXXXXXXXXXXIIQDSSVDILQALRSSEVGDEKVED 306
                      ++++    + Q    ++   +K+ED
Sbjct: 622 NTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLED 657


>AB208921-1|BAD92158.1|  636|Homo sapiens SFRS8 protein variant
           protein.
          Length = 636

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 22/96 (22%), Positives = 38/96 (39%)
 Frame = +1

Query: 19  IPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEAAESFIXXX 198
           +PDGK  +  F           E DL    PL+KN+   +++  DDE   E  ES     
Sbjct: 450 VPDGKLVKASFAPISFA-IKAKENDL---LPLEKNRVKLDDDSDDDEESKEGQESSSSAA 505

Query: 199 XXXXXXXXXXXIIQDSSVDILQALRSSEVGDEKVED 306
                      ++++    + Q    ++   +K+ED
Sbjct: 506 NTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLED 541


>DQ454817-1|ABE66901.1|   94|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 94

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 401 SLNSTSNTFSLFSKEFSMSDSTFLYSSTWYLKS 303
           SL+++SN FSL     +++D+   Y +TW L S
Sbjct: 45  SLDTSSNQFSLELTSVTVADTALFYCATWSLGS 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.308    0.128    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,388,667
Number of Sequences: 237096
Number of extensions: 669000
Number of successful extensions: 1773
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)