Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323F03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029932-1|ABM92806.1|  548|Drosophila melanogaster IP12341p pro...    31   0.72 
AE014134-2457|AAF53371.2|  548|Drosophila melanogaster CG18095-P...    31   0.72 
AF080444-1|AAD29852.1|  268|Drosophila melanogaster pugilistDomi...    29   3.8  

>BT029932-1|ABM92806.1|  548|Drosophila melanogaster IP12341p
           protein.
          Length = 548

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = -1

Query: 506 FRCNASVSTIALAATLKSSTDFVSDVSSGLGLFICSLNSTSNTFS-----LFSKEFSMSD 342
           F  N  + ++ L   L SS  F+S    GL   +  LN +SN        +FSK F + D
Sbjct: 203 FESNTHLRSLRLDQNLLSSLQFLSQ--RGLARLV-HLNLSSNLLQKLEPFVFSKNFELQD 259

Query: 341 STFLYSSTWYLKSSTFSSPTSLER 270
               Y++   L     S   SLER
Sbjct: 260 LDLSYNNITKLNKEALSGLDSLER 283


>AE014134-2457|AAF53371.2|  548|Drosophila melanogaster CG18095-PA
           protein.
          Length = 548

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = -1

Query: 506 FRCNASVSTIALAATLKSSTDFVSDVSSGLGLFICSLNSTSNTFS-----LFSKEFSMSD 342
           F  N  + ++ L   L SS  F+S    GL   +  LN +SN        +FSK F + D
Sbjct: 203 FESNTHLRSLRLDQNLLSSLQFLSQ--RGLARLV-HLNLSSNLLQKLEPFVFSKNFELQD 259

Query: 341 STFLYSSTWYLKSSTFSSPTSLER 270
               Y++   L     S   SLER
Sbjct: 260 LDLSYNNITKLNKEALSGLDSLER 283


>AF080444-1|AAD29852.1|  268|Drosophila melanogaster
           pugilistDominant protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -1

Query: 473 LAATLKSSTDFVSDVSSGLGLFICSLNSTSNTFSLFSKEFSMSDSTF-LYSSTWYLKSST 297
           +  T  S +   S +SS   L     +  S+ FSL S  FS+  S F L SS + L SS 
Sbjct: 175 IVGTPASLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSL 234

Query: 296 FS 291
           FS
Sbjct: 235 FS 236



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -1

Query: 488 VSTIALAATLKSSTDFVSDVSSGLGLFICSLNST-SNTFSLFSKEFSMSDSTF-LYSSTW 315
           V T A  ++L S    +  + S L   + SL S  S+ FSL S  FS+  S F L SS +
Sbjct: 176 VGTPASLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLF 235

Query: 314 YLKSSTFSSPTSL 276
            L S  FS  +SL
Sbjct: 236 SLLSXLFSLLSSL 248


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.308    0.128    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,697
Number of Sequences: 53049
Number of extensions: 197345
Number of successful extensions: 769
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)