Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323F03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 31 0.38
U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal glan... 30 1.2
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 30 1.2
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 28 4.7
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 28 4.7
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 27 8.1
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 27 8.1
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 27 8.1
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 27 8.1
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 25 DGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 171
D K+S+ + DE SDSEKD A D+ + +++E DD S+
Sbjct: 570 DEKNSKASDSEDEESGASDSEKDGAAAAGGDQKDDQTDSEWEDDVANSK 618
>U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 2 protein.
Length = 249
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = -1
Query: 497 NASVSTIALAATLKSSTDFVSDVSSGLGLFICSLNSTSNTFSLFSKEFSMSDSTF 333
+AS ST+ +A T++S + S SSG G + +NS + T ++ +D+ +
Sbjct: 66 DASGSTVTVATTIRSGSTVTSRTSSGTGC-VDRVNSATGTSDCANRRALCNDANY 119
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 431 VSSGLGLFICSLNS--TSNTFSLFSKEFSMSDSTFLYSSTWYLKSSTFSSPT 282
V G+ +C L S T TFS+ S+ F +S + TW S +PT
Sbjct: 6 VVGSCGVLVCVLASLYTIGTFSMRSRSFKLSSRMAITQDTWARMVSKHINPT 57
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 430 TSETKSVEDFNVAANAMVETEALHLNN 510
+ E K + D+N A+A+ E +LHLNN
Sbjct: 1881 SQEHKPLVDYNKLAHALREKASLHLNN 1907
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical protein
M79.1c protein.
Length = 1209
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 79 DSEKDLRAITPLDKNKNNSENEIHDDE-IQSEAAESFIXXXXXXXXXXXXXXIIQDSSVD 255
+ +L+ + P KN+N E+ D+E + + S + +IQ V+
Sbjct: 1071 EGSNELKHVVPPRKNRNQDESGSIDEEPVSKDMIVSLLK-------------VIQKEFVN 1117
Query: 256 ILQALRSSEVGDEKVEDFRYQVEEYKKVES 345
+ L SSE+ DEK++ F + +K+ S
Sbjct: 1118 LFN-LASSEITDEKLQQFVIMADNVQKLHS 1146
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical protein
M79.1b protein.
Length = 1214
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 79 DSEKDLRAITPLDKNKNNSENEIHDDE-IQSEAAESFIXXXXXXXXXXXXXXIIQDSSVD 255
+ +L+ + P KN+N E+ D+E + + S + +IQ V+
Sbjct: 1076 EGSNELKHVVPPRKNRNQDESGSIDEEPVSKDMIVSLLK-------------VIQKEFVN 1122
Query: 256 ILQALRSSEVGDEKVEDFRYQVEEYKKVES 345
+ L SSE+ DEK++ F + +K+ S
Sbjct: 1123 LFN-LASSEITDEKLQQFVIMADNVQKLHS 1151
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical protein
M79.1a protein.
Length = 1224
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 79 DSEKDLRAITPLDKNKNNSENEIHDDE-IQSEAAESFIXXXXXXXXXXXXXXIIQDSSVD 255
+ +L+ + P KN+N E+ D+E + + S + +IQ V+
Sbjct: 1086 EGSNELKHVVPPRKNRNQDESGSIDEEPVSKDMIVSLLK-------------VIQKEFVN 1132
Query: 256 ILQALRSSEVGDEKVEDFRYQVEEYKKVES 345
+ L SSE+ DEK++ F + +K+ S
Sbjct: 1133 LFN-LASSEITDEKLQQFVIMADNVQKLHS 1161
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 430 TSETKSVEDFNVAANAMVETEALHLNN 510
+ E K + D+N A+A+ E +LHLNN
Sbjct: 1881 SQEHKPLVDYNKLAHALREKASLHLNN 1907
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 55 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHD 153
N+E D S + +RA+ P DK+ N + NE D
Sbjct: 34 NNESLDYSSRRQFVRAVNPHDKHSNINNNESLD 66
>Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical
protein F34H10.4 protein.
Length = 452
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 413 LFICSLNSTSNTFSLFSKEFSMSDSTFLYSSTWYLKSSTFSSPTSL 276
+ + SLN T +F FS+S+S L SS ++LK ++S T L
Sbjct: 353 MILSSLNFQYVTPIVFYNIFSVSNSIQLCSSVFFLKVYSYSLKTIL 398
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 37 SELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEI 162
S L + L++ + E + RA+TP ++N+ENE H D++
Sbjct: 190 SSLQLSESRLEESTSQESE-RAVTPESWMEHNNENE-HPDQM 229
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 37 SELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEI 162
S L + L++ + E + RA+TP ++N+ENE H D++
Sbjct: 227 SSLQLSESRLEESTSQESE-RAVTPESWMEHNNENE-HPDQM 266
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 37 SELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEI 162
S L + L++ + E + RA+TP ++N+ENE H D++
Sbjct: 227 SSLQLSESRLEESTSQESE-RAVTPESWMEHNNENE-HPDQM 266
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 37 SELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEI 162
S L + L++ + E + RA+TP ++N+ENE H D++
Sbjct: 190 SSLQLSESRLEESTSQESE-RAVTPESWMEHNNENE-HPDQM 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.128 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,989,632
Number of Sequences: 27780
Number of extensions: 112533
Number of successful extensions: 478
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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