Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323F02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    25   0.47 
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    24   1.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   7.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -3

Query: 312 NSCDCTRFSSNYKGSSDEY--DRFEREHLARFGRDYNLMNRTPMQSETYSLDNEMNMKTN 139
           NS    R    Y+  S E   DR ERE         +L N+T   +  Y+ +N  N   N
Sbjct: 281 NSYKNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNNYNN 340

Query: 138 SNQLNYQH 115
            N  NY +
Sbjct: 341 YNNNNYNN 348


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 255 DRFEREHLARFGRDYNLMNRTPMQSETYSLDNEMNMKTNSNQLN 124
           DR ERE         +L N+T   +  Y+ +N  N   N+N  N
Sbjct: 69  DRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYN 112


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -3

Query: 321 YCW-NSCDCTRFSSNYKGSSDEYDR 250
           + W N  DC+   S YK + D++DR
Sbjct: 114 WSWANYKDCSGIVSAYKIAIDKFDR 138


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -3

Query: 321 YCW-NSCDCTRFSSNYKGSSDEYDR 250
           + W N  DC+   S YK + D++DR
Sbjct: 114 WSWANYKDCSGIVSAYKIAIDKFDR 138


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/56 (17%), Positives = 25/56 (44%)
 Frame = -3

Query: 345 WSNQRSSGYCWNSCDCTRFSSNYKGSSDEYDRFEREHLARFGRDYNLMNRTPMQSE 178
           W +  S+G+  +S    R + NYK  +   ++ ++       + +  + ++P   E
Sbjct: 422 WDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKE 477


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 349 HVGYAQAIPQNIPPYA 396
           H+G +   PQ IPP A
Sbjct: 152 HIGPSTPFPQFIPPNA 167


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 303 DCTRFSSNYKGSSDEYDR 250
           DC++  S +K + D++DR
Sbjct: 118 DCSKIVSAFKIAIDKFDR 135


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/56 (17%), Positives = 25/56 (44%)
 Frame = -3

Query: 345 WSNQRSSGYCWNSCDCTRFSSNYKGSSDEYDRFEREHLARFGRDYNLMNRTPMQSE 178
           W +  S+G+  +S    R + NYK  +   ++ ++       + +  + ++P   E
Sbjct: 422 WDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKE 477


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,995
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)