Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323E12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 58 4e-09
03_06_0484 + 34233042-34233258,34235317-34237049 57 1e-08
03_02_0546 - 9381989-9383733,9385838-9386054 57 1e-08
03_02_0540 + 9340379-9340592,9341250-9342988 57 1e-08
05_05_0109 - 22454539-22456268,22457069-22457279 56 2e-08
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 55 3e-08
11_08_0075 + 28173220-28173433,28175348-28177083 54 7e-08
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 51 5e-07
08_01_0654 - 5639419-5641449 50 9e-07
05_04_0392 - 20889699-20891726 50 1e-06
05_04_0052 - 17515344-17517353 48 3e-06
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 35 0.034
06_01_0426 + 3050332-3050526,3050864-3051116,3051923-3051980,305... 31 0.56
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 30 0.98
03_05_0057 + 20350971-20351405 28 4.0
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 28 5.2
04_04_0127 + 22957203-22957420,22957552-22957675,22957784-22958002 27 6.9
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 27 6.9
04_03_0661 - 18468244-18469580,18469610-18469619 27 9.1
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 58.0 bits (134), Expect = 4e-09
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
DDK K+E+A+ AI WL+ NQ AE++E++ + K LE + PIIAK+Y
Sbjct: 763 DDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMY 809
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
DDK K+E+A+ AI+WL++NQ AE EE++ + K LE + PIIAK+Y
Sbjct: 572 DDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMY 618
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
DDK K+E+A+ AIKWL+ NQ AE++E++ + K LE + PII+K+Y
Sbjct: 572 DDKKKIEDAIEDAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMY 618
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +2
Query: 11 DKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
DK K+E+A+ AI WL+ NQ AE+EE++ + K LE V PIIAK+Y
Sbjct: 572 DKKKIEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMY 617
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
DDK ++E+A+ AI WL+ NQ AE++E++ + K LE + PIIAK+Y
Sbjct: 570 DDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMY 616
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
++K K+EEAL A++WL++NQ AE EEY+++ K +E V PII+ +Y
Sbjct: 595 EEKEKVEEALKEALEWLDENQTAEKEEYEEKLKEVEAVCNPIISAVY 641
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +2
Query: 11 DKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
DK K+E+A+ AI+WL+ NQ AE++E+ + K LE + PIIAK+Y
Sbjct: 572 DKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMY 617
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = +2
Query: 5 DDDKAKMEEALXAAIKWLEDN----QDAESEEYKKQKKTLEDVVQPIIAKLY 148
DDD+ +ME AL A++WLEDN + AE E+Y+++ K +E V PII ++Y
Sbjct: 599 DDDRERMESALTEALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQVY 650
>08_01_0654 - 5639419-5641449
Length = 676
Score = 50.4 bits (115), Expect = 9e-07
Identities = 20/47 (42%), Positives = 34/47 (72%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
++K K+EEA+ A +WL+ N DA EEY+++ + LEDV P+++ +Y
Sbjct: 605 EEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVY 651
>05_04_0392 - 20889699-20891726
Length = 675
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/47 (42%), Positives = 34/47 (72%)
Frame = +2
Query: 8 DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
++K K+EEA+ A +WL+ N DA EEY+++ + LEDV P+++ +Y
Sbjct: 605 EEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVY 651
>05_04_0052 - 17515344-17517353
Length = 669
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +2
Query: 11 DKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
+K K+E A+ A +WL+ NQD EEY+++ + LEDV P+++ +Y
Sbjct: 603 EKEKVEAAVMEAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVY 648
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 35.1 bits (77), Expect = 0.034
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 26 EEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPI 133
E AA +WL+ N AE E+Y+++ K LED P+
Sbjct: 600 EAKARAASEWLDGNPAAEKEDYEEKLKELEDACGPV 635
>06_01_0426 +
3050332-3050526,3050864-3051116,3051923-3051980,
3052054-3052105,3052601-3052678,3053012-3053188,
3053594-3053806
Length = 341
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 11 DKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKL 145
DK ++ L A K L+ N+D SEE + ++K ED+V I A +
Sbjct: 177 DKTRLNTLLKHATKELQKNEDKLSEE-RSRRKEYEDMVMAIQASI 220
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 2 TDDDKAKMEEALXAAIKWLE-DNQDAESEEYKKQKKTLEDVVQPIIAKL 145
T+ ++ E L WL D +DA++ E+K++ L+ + PI+ +L
Sbjct: 695 TEQERESFAEKLNEVQDWLYMDGEDAQANEFKERLDQLKAIGDPILFRL 743
>03_05_0057 + 20350971-20351405
Length = 144
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 124 AAHHRQTLP-RPGWSTAPGGAG 186
A HHRQ P RP + PGGAG
Sbjct: 40 APHHRQPAPDRPSAAPEPGGAG 61
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 236 VWLRFSLITTRP*SRHLPAPPGAVLH 159
V+LR S++ P H P PPGA +H
Sbjct: 25 VFLRRSVLPPPPAPHHAPPPPGAHVH 50
>04_04_0127 + 22957203-22957420,22957552-22957675,22957784-22958002
Length = 186
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 229 CDSV*LQLVLEVVIFRRPRGRYSTLALVKF 140
C + L + L +V RPR RYS L LV F
Sbjct: 83 CTYLVLSIPLSIVHILRPRARYSRLFLVFF 112
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -3
Query: 519 LMLSISMLTNTQLTIAFXKNTKCTFFLQXQAHVSLTRACATADTRSDLDSVRFVAHAHSL 340
++L+ T+T + +A + K T Q +V + R+ + ADT+ D VR+ H H++
Sbjct: 37 VVLAADSRTSTGMYVANRASDKIT---QLTDNVYICRSGSAADTQVISDYVRYFLHQHTI 93
>04_03_0661 - 18468244-18469580,18469610-18469619
Length = 448
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 5 DDDKAKMEEALXAAIKWLEDNQDAESEE--YKKQKKTLEDVVQPIIAK 142
++ K K EEA AA L + E E+ +K+K L ++V P++A+
Sbjct: 117 EERKRKEEEAKRAAEAALNQKKLKEKEKKLLRKEKTRLRNLVAPVVAE 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,719,252
Number of Sequences: 37544
Number of extensions: 245686
Number of successful extensions: 729
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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