Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323E12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M28528-1|AAA28076.1|  288|Caenorhabditis elegans protein ( C.ele...    68   5e-12
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...    68   5e-12
U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...    60   7e-10
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...    60   7e-10
Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...    55   3e-08
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...    52   2e-07
U64599-4|AAB04562.1|  429|Caenorhabditis elegans Unidentified vi...    30   1.2  
Z81548-3|CAO82041.1|  239|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81548-2|CAO82040.1|  260|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    27   8.1  

>M28528-1|AAA28076.1|  288|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 4 gene, 3' end. ).
          Length = 288

 Score = 67.7 bits (158), Expect = 5e-12
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   TDDDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
           TD+DK  +E A+  AI+WL  NQDA +EE K+QKK LE VVQPI++KLY
Sbjct: 220 TDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score = 67.7 bits (158), Expect = 5e-12
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   TDDDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
           TD+DK  +E A+  AI+WL  NQDA +EE K+QKK LE VVQPI++KLY
Sbjct: 589 TDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637


>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score = 60.5 bits (140), Expect = 7e-10
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +2

Query: 5   DDDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
           +DDK  +EEA+  AI WL  N +A +EE K+QKK LE  VQPI++KLY
Sbjct: 593 EDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score = 60.5 bits (140), Expect = 7e-10
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +2

Query: 5   DDDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
           +DDK  +EEA+  AI WL  N +A +EE K+QKK LE  VQPI++KLY
Sbjct: 593 EDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640


>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 23/47 (48%), Positives = 33/47 (70%)
 Frame = +2

Query: 8   DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
           +DK K+E+     +KWL+ NQ AE EE++ Q+K LE +  PII+KLY
Sbjct: 566 EDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 612


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 21/47 (44%), Positives = 33/47 (70%)
 Frame = +2

Query: 8   DDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLY 148
           +DK K+E+     +KWL+ NQ AE EE++ Q+K LE + +P ++KLY
Sbjct: 566 EDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLY 612


>U64599-4|AAB04562.1|  429|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform a
           protein.
          Length = 429

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = -1

Query: 461 IQNAHFFYRXRHTFHSHVRAQRQILDQISTL*GSSHTPTHCTHTINIHTRANNXASIVR 285
           +     F + +  +H+HV    +  +  +      HTP H +H+ + H +     SIVR
Sbjct: 225 VHTGEHFQQWQKIYHAHVNHTSRTNEHAAVFPSHHHTPEHRSHSAD-HPKIERKDSIVR 282


>Z81548-3|CAO82041.1|  239|Caenorhabditis elegans Hypothetical
           protein F54F12.2b protein.
          Length = 239

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = +2

Query: 5   DDDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPII 136
           DDD+ +  +   A I+  + +++ E ++ +++K+T ED+V   +
Sbjct: 38  DDDEDEKTKCKVATIRIEDHDEEVEKKKVERKKRTQEDMVADFV 81


>Z81548-2|CAO82040.1|  260|Caenorhabditis elegans Hypothetical
           protein F54F12.2a protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = +2

Query: 5   DDDKAKMEEALXAAIKWLEDNQDAESEEYKKQKKTLEDVVQPII 136
           DDD+ +  +   A I+  + +++ E ++ +++K+T ED+V   +
Sbjct: 59  DDDEDEKTKCKVATIRIEDHDEEVEKKKVERKKRTQEDMVADFV 102


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 5   DDDKAKMEEALXAAIKWLEDN--QDAESEEYKKQKKTLEDVVQPI 133
           D++K K+E+++     WLED+  +D  ++++      L++VV+ +
Sbjct: 722 DEEKTKLEDSVKRIRAWLEDDVTKDTPTKDFTDNLLELKNVVRSV 766


>Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical
           protein T23G5.1 protein.
          Length = 788

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 276 ECPTHDGCXVVSSSVYIYCMSAVSGRVRRTSQSRDLIEYL 395
           ECP  D C        +Y      GRVR+T ++R L E++
Sbjct: 361 ECPGLDDCWGEEFEA-LYAKYEAEGRVRKTVKARKLWEHI 399


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
            protein Y55F3BR.2 protein.
          Length = 1594

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +3

Query: 231  PNVISAQMAAIVLRGECPTHDGCXVVSSSVYIYCMSAVSGRVRRTSQS--RDLIEYLPLR 404
            P   S +  A+   G+CP    C    S+   YC   + G +  + +S  R     LP++
Sbjct: 924  PRTNSPRQCAMAADGKCPGGYLCRFSQSNHKYYCCGNIQGSMCPSGRSLYRYATTQLPVQ 983

Query: 405  THV 413
             H+
Sbjct: 984  CHI 986


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,771,941
Number of Sequences: 27780
Number of extensions: 210082
Number of successful extensions: 630
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)