Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323E04f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 44 1e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 44 1e-04
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 40 0.003
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 40 0.003
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 38 0.006
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 38 0.011
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 38 0.011
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 38 0.011
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 38 0.011
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 38 0.011
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 38 0.011
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 37 0.014
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 37 0.019
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 36 0.044
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 35 0.077
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 35 0.077
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 35 0.077
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 35 0.077
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 33 0.18
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 0.72
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 31 1.3
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 30 1.7
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 30 2.2
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 30 2.2
U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po... 28 6.7
AY061169-1|AAL28717.1| 346|Drosophila melanogaster LD13761p pro... 28 8.8
AE014134-1186|AAF52452.2| 908|Drosophila melanogaster CG10354-P... 28 8.8
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 340 LCTTLNTVIQKTTRPEAWSKGTVILFFKKG-DRALLKNYRAISLLSQIYKLFSKVLTNRL 516
+C N + + P+ W K T+++ K G D+ +YR ISLL+ + KLF K+L R+
Sbjct: 471 ICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
Query: 517 A 519
+
Sbjct: 531 S 531
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 340 LCTTLNTVIQKTTRPEAWSKGTVILFFKKG-DRALLKNYRAISLLSQIYKLFSKVLTNRL 516
+C N + + P+ W K T+++ K G D+ +YR ISLL+ + KLF K+L R+
Sbjct: 471 ICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
Query: 517 A 519
+
Sbjct: 531 S 531
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRALL-KNYRAISLLSQIYKLFSKVLTNRL 516
N++++ PEAW V + K G A ++YR ISLLS + K+F ++L RL
Sbjct: 525 NSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRL 579
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRALL-KNYRAISLLSQIYKLFSKVLTNRL 516
N++++ PEAW V + K G + K+YR ISLLS + K+F ++L RL
Sbjct: 537 NSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRL 591
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLT 507
L L N+V+ P+AW ++I+ K G + +YR ISLL + K+ +++
Sbjct: 276 LQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLIL 335
Query: 508 NRL 516
NRL
Sbjct: 336 NRL 338
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL
Sbjct: 409 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 463
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL
Sbjct: 525 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 340 LCTTLNTVIQKTTRPEAWSKGTVILFFKKGD-RALLKNYRAISLLSQIYKLFSKVLTNRL 516
L N +++ P+ W +++ K G ++YR ISLLS + KL+ +++ NRL
Sbjct: 476 LALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRL 535
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL
Sbjct: 525 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL
Sbjct: 487 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 541
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N++++ P+AW V + K G K+YR ISLLS + K+F ++L RL
Sbjct: 525 NSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 337 QLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRALLKNYRAISLLSQIYKLFSKVLTNRL 516
++C N + + P+ W K +I+ K +YR ISLL+ + KLF K L R+
Sbjct: 12 RICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRI 71
Query: 517 A 519
+
Sbjct: 72 S 72
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLT 507
L L N+V+ P+AW ++I+ K G + +YR SLL + K+ +++
Sbjct: 474 LQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLIL 533
Query: 508 NRL 516
NRL
Sbjct: 534 NRL 536
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 382 PEAWSKGTVILFFKKG-DRALLKNYRAISLLSQIYKLFSKVLTNRL 516
P+ W +I+ K G + + +YR ISLLS I KLF K L RL
Sbjct: 487 PQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRL 532
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL
Sbjct: 81 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRL 135
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL
Sbjct: 528 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRL 582
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL
Sbjct: 528 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRL 582
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLLSQIYKLFSKVLTNRL 516
N +++ P W ++ + K G L +YR ISLLS + KL ++L RL
Sbjct: 528 NNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRL 582
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 382 PEAWSKGTVILFFK-KGDRALLKNYRAISLLSQIYKLFSKVLTNRL 516
P+ W K ++L K KG + ++YR + LL + KLF ++L R+
Sbjct: 455 PKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARI 500
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 295 SYXXXXNQYRIVLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKG-DRALLKNYRAISLL 471
SY N N++ N + P+A+ +I K D+ +YR ISL
Sbjct: 456 SYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSSYRPISLN 514
Query: 472 SQIYKLFSKVLTNRL 516
I K+ K++ RL
Sbjct: 515 CCIAKILDKIIAKRL 529
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 295 SYXXXXNQYRIVLNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRAL-LKNYRAISLL 471
SY N + +L N ++ P W +I K + +YR ISLL
Sbjct: 460 SYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLL 519
Query: 472 SQIYKLFSKVLTNRL 516
S + K K++ RL
Sbjct: 520 SCLGKTLEKIIAQRL 534
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 NTVIQKTTRPEAWSKGTVILFFKKGD-RALLKNYRAISLLSQIYKLFSKVLTNRL 516
N +++ P W G + + K G +YR ISLL I K+F +++ R+
Sbjct: 480 NAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRI 534
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRA-LLKNYRAISLLSQIYKLFSKVLT 507
+N + N +Q P W ++ K G ++YR ISLLS + K+ K++
Sbjct: 497 INHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIK 556
Query: 508 NRL 516
RL
Sbjct: 557 LRL 559
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 LNQLCTTLNTVIQKTTRPEAWSKGTVILFFKKGDRA-LLKNYRAISLLSQIYKLFSKVLT 507
+N + N +Q P W ++ K G ++YR ISLLS + K+ K++
Sbjct: 445 INHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIK 504
Query: 508 NRL 516
RL
Sbjct: 505 LRL 507
>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
polyposis coli protein.
Length = 2416
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 249 RNKGCFGIV*SLKITELQEMTESVQNCSQPIMHNAQHRHP 368
R GC ++ +++ + + V+ C++ +HN H HP
Sbjct: 259 RRSGCMPLL--VQMMHAPDNDQEVRKCAEQALHNVVHSHP 296
>AY061169-1|AAL28717.1| 346|Drosophila melanogaster LD13761p
protein.
Length = 346
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 151 ASHTPKPFAHPENDHRAPLVRHYTED 228
+SH P+P+A +D +P++ Y ED
Sbjct: 24 SSHVPEPWAKLMSDPESPIIDFYPED 49
>AE014134-1186|AAF52452.2| 908|Drosophila melanogaster CG10354-PA
protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 151 ASHTPKPFAHPENDHRAPLVRHYTED 228
+SH P+P+A +D +P++ Y ED
Sbjct: 586 SSHVPEPWAKLMSDPESPIIDFYPED 611
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,798,802
Number of Sequences: 53049
Number of extensions: 483610
Number of successful extensions: 1538
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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