Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323E03f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 109 3e-24
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 109 3e-24
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 95 4e-20
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 84 1e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 84 1e-16
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 84 1e-16
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 84 1e-16
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 83 3e-16
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 79 4e-15
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 60 2e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 60 2e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 60 2e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 60 2e-09
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 58 1e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 54 1e-07
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 54 1e-07
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 54 1e-07
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 54 1e-07
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 54 1e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 50 1e-06
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 48 6e-06
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 44 1e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 4e-04
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 33 0.18
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC... 33 0.18
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 33 0.18
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 1.3
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 30 1.7
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 30 1.7
DQ503470-1|ABF54966.1| 353|Drosophila melanogaster OLF186-F pro... 29 2.9
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 29 2.9
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 29 2.9
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 29 2.9
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 29 2.9
AY071273-1|AAL48895.1| 351|Drosophila melanogaster RE30427p pro... 29 3.8
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro... 29 3.8
AF188634-1|AAF01457.1| 351|Drosophila melanogaster F protein pr... 29 3.8
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ... 29 3.8
AE013599-2579|AAM68473.1| 351|Drosophila melanogaster CG11430-P... 29 3.8
AE013599-2578|AAF57780.2| 351|Drosophila melanogaster CG11430-P... 29 3.8
AY094943-1|AAM11296.1| 469|Drosophila melanogaster RH56938p pro... 29 5.1
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 29 5.1
AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA... 29 5.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 109 bits (261), Expect = 3e-24
Identities = 52/167 (31%), Positives = 94/167 (56%)
Frame = +1
Query: 19 SLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVS 198
S +++ +Q + + +++KW+I INP K+ A+ F + R P +P R R
Sbjct: 709 SEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRY---LPDRQLR------- 758
Query: 199 PITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRN 378
+ PI WV ++YLG+ D+ +TF+ HI + I+ LYP++ +SKLS+ N
Sbjct: 759 ---ILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISN 815
Query: 379 KVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
K+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++ + P+
Sbjct: 816 KIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 862
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 109 bits (261), Expect = 3e-24
Identities = 52/167 (31%), Positives = 94/167 (56%)
Frame = +1
Query: 19 SLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVS 198
S +++ +Q + + +++KW+I INP K+ A+ F + R P +P R R
Sbjct: 657 SEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRY---LPDRQLR------- 706
Query: 199 PITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRN 378
+ PI WV ++YLG+ D+ +TF+ HI + I+ LYP++ +SKLS+ N
Sbjct: 707 ---ILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISN 763
Query: 379 KVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
K+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++ + P+
Sbjct: 764 KIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 810
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 64 QWFRKWRIDINPTKSAAVLF--KRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVS 237
+W R+W I IN +KS V F KR PP P+ + P+P +
Sbjct: 703 EWARRWNIGINSSKSNNVCFTLKRRTPP-------------------PVYIEEVPVPQPN 743
Query: 238 KVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 417
KYLGV LDR +TF H+ +R R + + Y +L SRSKLSL NK+T+YK + P
Sbjct: 744 AAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNW 803
Query: 418 TYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
Y ++ A +H+K +Q IQ++ R+ G W
Sbjct: 804 KYGCQIWGLACDSHIKRIQAIQNKVARLITGCEW 837
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 84.2 bits (199), Expect = 1e-16
Identities = 53/161 (32%), Positives = 80/161 (49%)
Frame = +1
Query: 37 LQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFG 216
LQ + QW W + IN K A V F N T S P ++L G
Sbjct: 699 LQEYLDAFQQWAENWNVRINAEKCANVTF-----ANRTGSCP------------GVSLNG 741
Query: 217 QPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYK 396
+ I KYLG+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK
Sbjct: 742 RLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYK 801
Query: 397 TCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
+ + P + Y V+ AA++HL ++++Q++ R GAPW
Sbjct: 802 SILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPW 842
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 84.2 bits (199), Expect = 1e-16
Identities = 53/161 (32%), Positives = 80/161 (49%)
Frame = +1
Query: 37 LQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFG 216
LQ + QW W + IN K A V F N T S P ++L G
Sbjct: 501 LQEYLDAFQQWAENWNVRINAEKCANVTF-----ANRTGSCP------------GVSLNG 543
Query: 217 QPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYK 396
+ I KYLG+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK
Sbjct: 544 RLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYK 603
Query: 397 TCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
+ + P + Y V+ AA++HL ++++Q++ R GAPW
Sbjct: 604 SILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPW 644
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/157 (32%), Positives = 76/157 (48%)
Frame = +1
Query: 49 VATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIP 228
+ ++ +W WRI IN K V F N P+ L IP
Sbjct: 689 LTSVERWLADWRISINVQKCKQVTFT-----------------LNKQTCPPLVLNNICIP 731
Query: 229 WVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIR 408
+V YLGV LDR +T+R HI+ L+ ++ +RS LSL K LY + ++
Sbjct: 732 QADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLK 791
Query: 409 PVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
P+ TY S ++ +A+R+++ +Q QSR RI GAPW
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPW 828
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/157 (32%), Positives = 76/157 (48%)
Frame = +1
Query: 49 VATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIP 228
+ ++ +W WRI IN K V F N P+ L IP
Sbjct: 689 LTSVERWLADWRISINVQKCKQVTFT-----------------LNKQTCPPLVLNNICIP 731
Query: 229 WVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIR 408
+V YLGV LDR +T+R HI+ L+ ++ +RS LSL K LY + ++
Sbjct: 732 QADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLK 791
Query: 409 PVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
P+ TY S ++ +A+R+++ +Q QSR RI GAPW
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPW 828
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 82.6 bits (195), Expect = 3e-16
Identities = 50/162 (30%), Positives = 81/162 (50%)
Frame = +1
Query: 34 RLQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLF 213
+L + + + +W WRI +N K V F R P P+ L
Sbjct: 686 QLALYLIDIKKWLSDWRIKVNEQKCKHVTFTLNR-----QDCP------------PLLLN 728
Query: 214 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 393
P+P +V YLGV LDR +T+R HI+ + + L+ ++ S S LSL +KV LY
Sbjct: 729 SIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLY 788
Query: 394 KTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
+ ++P+ TY S ++ +A+ +++ +Q QS+ R GAPW
Sbjct: 789 NSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPW 830
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 79.0 bits (186), Expect = 4e-15
Identities = 48/173 (27%), Positives = 84/173 (48%)
Frame = +1
Query: 1 YSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRA 180
YS + R LQ + T+ W ++W + +NP K+ P + +
Sbjct: 686 YSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTIN---------------PCFTLKT 730
Query: 181 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRS 360
+ +PI L G + S+ KYLG+TLD+ +TF PH+K R + +L +L +S
Sbjct: 731 LSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKS 790
Query: 361 KLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 519
++LR K +Y C+ P+ Y ++ AA+++ +QV+Q+R R P+
Sbjct: 791 TMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPY 843
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Frame = +1
Query: 64 QWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKV 243
+W +KW I IN K+ +LF ++ T+ +P + GQ ++K
Sbjct: 316 RWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAAKLNKQ 361
Query: 244 KYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 423
+YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K + P+ Y
Sbjct: 362 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 421
Query: 424 ASVVFAH-AARTHLKSLQVIQSRFCRIAVGA 513
A ++ + T K +Q +++++ R + A
Sbjct: 422 AIAIWGSLVSDTQAKKIQTMENKYIRRIINA 452
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Frame = +1
Query: 64 QWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKV 243
+W +KW I IN K+ +LF ++ T+ +P + GQ ++K
Sbjct: 763 RWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAAKLNKQ 808
Query: 244 KYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 423
+YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K + P+ Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 424 ASVVFAH-AARTHLKSLQVIQSRFCRIAVGA 513
A ++ + T K +Q +++++ R + A
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINA 899
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Frame = +1
Query: 64 QWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKV 243
+W +KW I IN K+ +LF ++ T+ +P + GQ ++K
Sbjct: 763 RWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAAKLNKQ 808
Query: 244 KYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 423
+YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K + P+ Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 424 ASVVFAH-AARTHLKSLQVIQSRFCRIAVGA 513
A ++ + T K +Q +++++ R + A
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINA 899
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Frame = +1
Query: 64 QWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKV 243
+W +KW I IN K+ +LF ++ T+ +P + GQ ++K
Sbjct: 763 RWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAAKLNKQ 808
Query: 244 KYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 423
+YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K + P+ Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 424 ASVVFAH-AARTHLKSLQVIQSRFCRIAVGA 513
A ++ + T K +Q +++++ R + A
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINA 899
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 57.6 bits (133), Expect = 1e-08
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
T W KW I +N K+ V+F + + +P S + + GQ I
Sbjct: 761 TFSDWADKWGISVNAAKTGHVIF------TLKNDLPTNSMN--------VKIKGQTIKKE 806
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGVTLD +T H+ + + + +L +L RSKL + K+ + K+ + P+
Sbjct: 807 SKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPI 866
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 867 WQYAIAAWGPLVTDAQIRRVQVEENRKIR 895
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
T W KW I +N K+ V++ + + IP + + + GQ I
Sbjct: 633 TFSDWADKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKE 678
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+
Sbjct: 679 SKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 738
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 739 WQYAIAAWGPLVTDAQIRRIQVEENRKMR 767
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
T W KW I +N K+ V++ + + IP + + + GQ I
Sbjct: 749 TFSDWADKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKE 794
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+
Sbjct: 795 SKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 854
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 855 WQYAIAAWGPLVTDAQIRRIQVEENRKMR 883
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
T W KW I +N K+ V++ + + IP + + + GQ I
Sbjct: 749 TFSDWADKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKE 794
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+
Sbjct: 795 SKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 854
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 855 WQYAIAAWGPLVTDAQIRRIQVEENRKMR 883
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
T W KW I +N K+ V++ + + IP + + + GQ I
Sbjct: 711 TFSDWADKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKE 756
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+
Sbjct: 757 SKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 816
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 817 WQYAIAAWGPLVTDAQIRRIQVEENRKMR 845
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
T W KW I +N K+ V++ + + IP + + + GQ I
Sbjct: 749 TFSDWADKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKE 794
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+
Sbjct: 795 SKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 854
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 855 WQYAIAAWGPLVTDAQIRRIQVEENRKMR 883
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 TMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 234
+ W KW I +N K+ V+F + + +P +++ + + GQ I
Sbjct: 749 SFSDWADKWGISVNAAKTGHVIF------TLKNDLP--------TSLRTMKIKGQVIKIE 794
Query: 235 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 414
SK YLGV LD +T H+ + + ++ +L RSKL + K+ + K+ + P+
Sbjct: 795 SKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPI 854
Query: 415 MTYASVVFAH-AARTHLKSLQVIQSRFCR 498
YA + ++ +QV ++R R
Sbjct: 855 WQYAIAAWGPLVTDAQIRRIQVEENRKMR 883
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +1
Query: 214 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 393
G+ +P+V +YLG+T+ GM F HI ++R R ++G L +L + S R + T+Y
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
Query: 394 KTCIRPVMTYASVVFAHAA 450
+ P + + + V+ A
Sbjct: 785 DGLMAPCVLFGAPVWYDTA 803
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +1
Query: 214 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 393
GQ I SK YLGV LD +T H+ + + ++ +L RSKL + K+ +
Sbjct: 3 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 62
Query: 394 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCR 498
K+ + P+ YA + ++ +QV ++R R
Sbjct: 63 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMR 98
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/116 (25%), Positives = 54/116 (46%)
Frame = +1
Query: 166 RSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPM 345
R +R N +S I + I V+ +K LG+T D + F+ H +T+R + + +
Sbjct: 724 RKQRCN---LSDIVFNSRTIKDVNFLKILGITFDPKLLFKQHCQTLRKQLETRFNIIKFL 780
Query: 346 LCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 513
S + ++ + + + + + Y +F A++HLK LQV R A+ A
Sbjct: 781 SSKYSYIHIKTLIDITRALMLSKIDYGLPIFGWCAKSHLKKLQVPYHGAVRRAIHA 836
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/97 (21%), Positives = 44/97 (45%)
Frame = +1
Query: 223 IPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTC 402
IP V+ +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 403 IRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 513
I + Y ++ HA ++ L ++ + R+A+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
isoform C protein.
Length = 1293
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 40 QIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 219
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 220 PIP 228
+P
Sbjct: 818 NVP 820
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 40 QIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 219
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 220 PIP 228
+P
Sbjct: 818 NVP 820
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 151 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILG 330
+ + L S R + + + + G I +KYLGV +DR ++F+ H + +AA
Sbjct: 688 TEVVLLSSRKSVECMR-VEVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAMTAA 746
Query: 331 RL 336
L
Sbjct: 747 AL 748
>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein.
Length = 1238
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 100 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 249
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 250 LGVTLDRG 273
G DRG
Sbjct: 1095 FGFG-DRG 1101
>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
protein.
Length = 1535
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 100 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 249
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 250 LGVTLDRG 273
G DRG
Sbjct: 1095 FGFG-DRG 1101
>DQ503470-1|ABF54966.1| 353|Drosophila melanogaster OLF186-F
protein.
Length = 353
Score = 29.5 bits (63), Expect = 2.9
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 2/139 (1%)
Frame = +3
Query: 96 PHEKRSGA-LQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQR 272
P RS A + G+ +HHF+H + H + HP+
Sbjct: 25 PRASRSSAVITTGNHQQHHFQHVVAAAVAAATSVATGHQFQQQFPLHAH---PHPHPQHH 81
Query: 273 DDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRSVRSRS 449
+ P+ + + + RT++SN+L PP S QN PR H S S+S
Sbjct: 82 SNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASSSMSQS 138
Query: 450 PHPLEIPSGYPITILQDSR 506
L P+ LQ SR
Sbjct: 139 GEDLHSPTYLSWRKLQLSR 157
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 181 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 303
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 181 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 303
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 181 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 303
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 181 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 303
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>AY071273-1|AAL48895.1| 351|Drosophila melanogaster RE30427p
protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.8
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +3
Query: 96 PHEKRSGA-LQKGSPSEHHFEHPTP**ARKHLRR*SHHSL---WPAHSVGLEGQISRRHP 263
P RS A + G+ +HHF+H + H +P H+ HP
Sbjct: 25 PRAARSSAVITTGNHQQHHFQHVVAAAVAAATSVATGHQFQQQFPLHA--------HPHP 76
Query: 264 RQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRSVR 440
+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 77 QHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASSSM 133
Query: 441 SRSPHPLEIPSGYPITILQDSR 506
S+S L P+ LQ SR
Sbjct: 134 SQSGEDLHSPTYLSWRKLQLSR 155
>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 96 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 275
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 276 DIPSPYKNGTR 308
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AF188634-1|AAF01457.1| 351|Drosophila melanogaster F protein
protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.8
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +3
Query: 96 PHEKRSGA-LQKGSPSEHHFEHPTP**ARKHLRR*SHHSL---WPAHSVGLEGQISRRHP 263
P RS A + G+ +HHF+H + H +P H+ HP
Sbjct: 25 PRAARSSAVITTGNHQQHHFQHVVAAAVAAATSVATGHQFQQQFPLHA--------HPHP 76
Query: 264 RQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRSVR 440
+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 77 QHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASSSM 133
Query: 441 SRSPHPLEIPSGYPITILQDSR 506
S+S L P+ LQ SR
Sbjct: 134 SQSGEDLHSPTYLSWRKLQLSR 155
>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 96 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 275
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 276 DIPSPYKNGTR 308
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AE013599-2579|AAM68473.1| 351|Drosophila melanogaster CG11430-PB,
isoform B protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.8
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +3
Query: 96 PHEKRSGA-LQKGSPSEHHFEHPTP**ARKHLRR*SHHSL---WPAHSVGLEGQISRRHP 263
P RS A + G+ +HHF+H + H +P H+ HP
Sbjct: 25 PRAARSSAVITTGNHQQHHFQHVVAAAVAAATSVATGHQFQQQFPLHA--------HPHP 76
Query: 264 RQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRSVR 440
+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 77 QHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASSSM 133
Query: 441 SRSPHPLEIPSGYPITILQDSR 506
S+S L P+ LQ SR
Sbjct: 134 SQSGEDLHSPTYLSWRKLQLSR 155
>AE013599-2578|AAF57780.2| 351|Drosophila melanogaster CG11430-PA,
isoform A protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.8
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +3
Query: 96 PHEKRSGA-LQKGSPSEHHFEHPTP**ARKHLRR*SHHSL---WPAHSVGLEGQISRRHP 263
P RS A + G+ +HHF+H + H +P H+ HP
Sbjct: 25 PRAARSSAVITTGNHQQHHFQHVVAAAVAAATSVATGHQFQQQFPLHA--------HPHP 76
Query: 264 RQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRSVR 440
+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 77 QHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASSSM 133
Query: 441 SRSPHPLEIPSGYPITILQDSR 506
S+S L P+ LQ SR
Sbjct: 134 SQSGEDLHSPTYLSWRKLQLSR 155
>AY094943-1|AAM11296.1| 469|Drosophila melanogaster RH56938p
protein.
Length = 469
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 169 SRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIK 297
S+ ANT +V P+ GQ +P ++ V L RGM F K
Sbjct: 336 SKSANTLSVQPMNHLGQSLPNLNMHHSHTVPLRRGMAFSTSTK 378
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 139 PNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRA 315
P T ++ + SR+A +A + + G + +KYL V +D ++FR H+ +A
Sbjct: 123 PEKTKAVLISSRKAVETAT--VEVGGTLVSSSRAIKYLEVMIDTRLSFREHLAYASSKA 179
>AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA
protein.
Length = 1029
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 169 SRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIK 297
S+ ANT +V P+ GQ +P ++ V L RGM F K
Sbjct: 896 SKSANTLSVQPMNHLGQSLPNLNMHHSHTVPLRRGMAFSTSTK 938
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,060,089
Number of Sequences: 53049
Number of extensions: 600546
Number of successful extensions: 1817
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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