Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323E02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0301 + 4016588-4016627,4016715-4018837 33 0.11
05_05_0149 - 22733703-22736216 31 0.74
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 30 0.98
04_04_0597 + 26502819-26502853,26503030-26503171,26503929-265041... 29 1.7
12_01_0349 + 2677347-2677424,2677548-2677631,2677717-2677821,267... 29 2.3
03_02_0178 + 6195402-6199158,6199438-6200003 28 4.0
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 28 4.0
11_06_0559 + 24972403-24972445,24972590-24972680,24973911-249740... 28 5.2
03_06_0313 + 33073542-33074464,33074901-33075069 28 5.2
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 28 5.2
12_02_0604 + 20920609-20922144 27 6.9
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 27 6.9
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 27 9.1
12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302... 27 9.1
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 33.5 bits (73), Expect = 0.11
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Frame = +3
Query: 150 ESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNN----------P 299
E+ ++ EV ++A N+E+ +E L E D K ++ QAK +LV + NN
Sbjct: 462 EAFEEEKEVTAKAFNVEK--TEILKELEDLKMKVLEIQAKKDLVESENNVLQLDIVTTKQ 519
Query: 300 HSSQLSMNILEAQTAVQLLEQEEGI----INLQIENAIKEFVEDRTRIVEETALNAAL 461
+Q + I + ++ LE+E+ + N++ +KE +ED R V+E N L
Sbjct: 520 KYNQFEVEIKSLKNELKALEEEKEVTAKAFNVEKAEILKE-LEDLKRKVQEIQANKYL 576
>05_05_0149 - 22733703-22736216
Length = 837
Score = 30.7 bits (66), Expect = 0.74
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +3
Query: 135 DLKQNESKNDDNEVLSQAKNM-ERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQ 311
D QNE + D EV + K + E ++++ D L + LEL N ++
Sbjct: 281 DSVQNEIRFDLQEVCQKVKELIELHPGVSVTDLADKVDRLVEKVIDLELATTSQNAQINR 340
Query: 312 LSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEVSN 485
+ I + +Q LE+E+ + + ++ K + DR + VEE L A + + N
Sbjct: 341 MKTEIDDLHKCLQALEEEKSAL---VADSSK--LVDRLKQVEE-VLQAVQHLGNSIQN 392
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 30.3 bits (65), Expect = 0.98
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +3
Query: 147 NESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLSMNI 326
N + + +L QA++ + LSE + K EL + + + S I
Sbjct: 390 NSKLAERDSLLRQAEDEHAKAQLLLSEALSHKDELEVNLKSINEQHGESRAAAENASQKI 449
Query: 327 LEAQTAVQLLEQEEGIINLQIENA 398
LE + +Q L E + LQ+E A
Sbjct: 450 LELEALLQTLHATEEALKLQLEEA 473
>04_04_0597 +
26502819-26502853,26503030-26503171,26503929-26504186,
26504276-26504407,26504834-26504980
Length = 237
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 231 IDSKAEL-CGEQAKLELVANYNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKE 407
I K E E +K LV + ++ + QLL+ E + +++ N +
Sbjct: 95 IQKKRETKAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDA 154
Query: 408 FVEDRTRIVEETALNAALAIRE-EVSNDLAYLLDTTQHA 521
E T+++E +ALN ++ + + + YL D A
Sbjct: 155 VQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEA 193
>12_01_0349 +
2677347-2677424,2677548-2677631,2677717-2677821,
2678217-2678363,2678987-2679244,2679337-2679468,
2679550-2679570
Length = 274
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 231 IDSKAEL-CGEQAKLELVANYNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKE 407
I K E E +K LV + ++ + QLL+ E + +++ N +
Sbjct: 174 IQKKRETKAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDA 233
Query: 408 FVEDRTRIVEETALNAALAIRE-EVSNDLAYLLD 506
E T+++E +ALN ++ + + + YL D
Sbjct: 234 VQETETKMIEMSALNHLMSTHVLQQAQQIQYLYD 267
>03_02_0178 + 6195402-6199158,6199438-6200003
Length = 1440
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 306 SQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEVSN 485
S S+ E Q QL+ G+I I + E + R+++E N+ +RE +S+
Sbjct: 956 SSSSLTRGERQDGQQLVLNGAGVIERIISKIVSEPLHHTGRMLDEMTSNSVTYLREAISD 1015
Query: 486 DLA 494
+A
Sbjct: 1016 IIA 1018
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 174 VLSQAK-NMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLSMNILEAQTAVQ 350
VL + K + ER S +++E + EL + LEL+ + + +L E ++ +Q
Sbjct: 418 VLEKIKEHFERDGSISVAEITEHIDELVNKVVDLELMVSSQSSQIDRLCRENSELESCLQ 477
Query: 351 LLEQEEGIINLQIENAIKEFVEDRTRI 431
LE+E ++ +K+ E+ R+
Sbjct: 478 SLEEENVSDPDKVNEKLKKLEEELVRV 504
>11_06_0559 +
24972403-24972445,24972590-24972680,24973911-24974030,
24974121-24974237,24974745-24974840,24975317-24975610,
24977153-24977258,24977365-24977566,24977671-24977792
Length = 396
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 171 EVLSQAKN-MERRLSEALSEYIDSKAELCGEQAKLEL 278
E++ + K M + A +YI+ KA+L G Q LEL
Sbjct: 261 EIVERGKKWMGEEVMVAFKKYIEGKADLAGHQYHLEL 297
>03_06_0313 + 33073542-33074464,33074901-33075069
Length = 363
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 511 VVSSKYARSLLTSSLIANAALSAVSSTIRVR-SSTNSLIAFSIWRFMIPSSCSRSWTA 341
V+S + S+ TSS + S S I + ++TNS A + PSSC+R TA
Sbjct: 204 VISFSFDNSVCTSSAATSFFTSISSQLISMSDAATNSAAAAAAPTTKKPSSCARKATA 261
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +3
Query: 330 EAQTAVQLLEQEEGIINL---QIENAIKEFVEDRTRIVEE--TALNAALAIREEV 479
E + V+LL+++EG+INL + E + ED+ RI++E AL+ + +EE+
Sbjct: 332 EKEDMVRLLKEKEGMINLKTVKAEETQRIEDEDKYRIIKEKDDALDRLVKEKEEM 386
>12_02_0604 + 20920609-20922144
Length = 511
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +3
Query: 216 ALSEYIDS-KAELCGEQAKLELVANYN---NPHSSQLSMNILEAQTAVQLLEQEEGIINL 383
++ E +D+ KAE C ++K+E + N N + +L + ++E + + +L ++ +NL
Sbjct: 415 SVQEALDAEKAEACKLKSKIEAIENCNVEKDGEIGKLKVALMEKREKIDVLIKDIEQLNL 474
Query: 384 QIENA 398
++ A
Sbjct: 475 EVAEA 479
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/119 (18%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 111 DLYVSKKFDLKQNESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANY 290
D+ + F ++ ESK + + +Q ++ + + S ++ A+ ++ ++ Y
Sbjct: 250 DVRPTASFSREKKESKKFEQDKANQMPSLASAPTSSYSSEAEAMADTWEKEKMAKIKKQY 309
Query: 291 NNPHSSQLSMNILEAQTAVQLLEQEEG-IINLQIENAIKEFVEDRTRIVEETALNAALA 464
N + + + A + +E +EG + E A++E+ ++ TRI + A + A
Sbjct: 310 NMTMDTIVEWEAEKKAKAKRQMELKEGDNSERKREKALEEYNDEITRINKVAAASRLTA 368
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +3
Query: 87 QELYLSHFDLYVSKKFDLKQN--ESKNDDNEVLSQAKNMERRLSE---ALSEYIDSKAEL 251
+E++ + V K +L++N + ++ +NE+LSQ + + +L++ ++ ++ D A L
Sbjct: 440 KEVFDKELNAGVEAKKNLEENMQQLRSRENEILSQERELRAKLNKILHSIPKHEDELAHL 499
Query: 252 CGEQAKLELVANYNNPHSSQLSMNILEAQTAVQLLEQEE 368
E K+ + L + E T ++ L+ ++
Sbjct: 500 REEHNKIAKERQTSGVKYQMLKQRLDEIDTKLRELKADK 538
>12_02_0652 -
21527768-21528328,21528980-21529738,21530151-21530216,
21530550-21530598,21530717-21530817,21531469-21531540,
21531630-21531746,21531870-21531959,21532224-21532319,
21532429-21532482,21533210-21533290,21533382-21533581,
21533677-21533804,21533943-21533995,21534312-21534374
Length = 829
Score = 27.1 bits (57), Expect = 9.1
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Frame = +3
Query: 69 DQYKQLQELYLSHFDLYVSK-KFDLKQN----ESKNDDNEVLSQAKNMERRLSEALSEYI 233
DQ+ L E++ SHF ++SK + D++ N S+ + A+ +E++ E EYI
Sbjct: 570 DQHPVLSEIFDSHFVSFLSKLETDIRDNIMDIFSRTKTATAIIPAE-LEQKNGEVDGEYI 628
Query: 234 DSKAELCGEQA-KLELVANYNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEF 410
+Q +++ + N + +L + +A L + G +QIE ++++
Sbjct: 629 KRLKSFVEKQCNEMQDLLGRNAMLAEEL-VRTGGGNSADSLQKPSSGRERVQIE-SLRQE 686
Query: 411 VEDRTRIVEETALNAA-LAIREEVSN 485
+E TR +E AL A I E SN
Sbjct: 687 LEGATRRIE--ALRAEHTQIEAEASN 710
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,245,546
Number of Sequences: 37544
Number of extensions: 176428
Number of successful extensions: 593
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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