Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323E02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 31 0.66
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 2.0
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 2.0
AC199158-8|ABO33283.1| 439|Caenorhabditis elegans Hypothetical ... 29 2.0
AC199158-4|ABO33286.1| 439|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.0
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 28 3.5
U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate fi... 28 3.5
U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate fi... 28 3.5
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 28 3.5
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 28 3.5
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 28 3.5
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical p... 27 8.1
U23516-5|AAG38885.1| 449|Caenorhabditis elegans Glycosylation r... 27 8.1
AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein. 27 8.1
AF082010-1|AAD03022.1| 449|Caenorhabditis elegans UDP-N-acetylg... 27 8.1
AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid tr... 27 8.1
AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid tr... 27 8.1
AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor wi... 27 8.1
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 27 8.1
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 27 8.1
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 37.5 bits (83), Expect = 0.006
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Frame = +3
Query: 69 DQYKQLQELYLSHFDLYVSKKFDLKQNESKN----DDNEVLSQ-AKNMERRLSEALSEYI 233
D+ K+L + L + +S+K ++ +++N +N++ +KN+ SE L
Sbjct: 231 DENKKLSDDNLEYRKTMLSQKSEIDSLKAENFKLVSENQLNHDVSKNLAALQSEKLKLTE 290
Query: 234 DSKAELCGEQAKLELVANYNNPHSSQLSMNILE-AQTAVQLLEQE----EGIINLQIENA 398
S+ E+ G + K+E++ + N+ SSQ+ N E A+ +LLE E L++++
Sbjct: 291 ISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVLLLETRYQLEVDDL 350
Query: 399 IKEFVEDR-TRIVEETALNAALAIREE 476
K F D+ +++ T+L L EE
Sbjct: 351 KKSFESDKECFLLKMTSLEEKLKSAEE 377
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +3
Query: 171 EVLSQAKNMERRLSEALSEYIDSKAELCG------EQAKLELVANYNNPHSSQLSMNILE 332
+VL +AK ++L + I CG Q +E+ ANY S + IL+
Sbjct: 32 KVLERAKEYSKKLEAPILAKICEVGYFCGAHVVRTNQVTMEMGANYYGECSIHTAEKILD 91
Query: 333 AQTAVQLLEQEEGIINLQIENAIKEFVED 419
+ + ++EEG+ ++++ + +F +D
Sbjct: 92 RRVSEMRRQREEGLDSIRMLDDKIKFAQD 120
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 240 KAELCGEQAKLELVANYNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVED 419
K L G++ K ++ P N + Q A + E+EE +L+ + +EFVE
Sbjct: 1620 KTSLLGDKRKQRRLSKSLRPQDMAGFENEEDLQDAADMEEEEESKSDLEDHSDEEEFVEK 1679
Query: 420 RTRI-VEETALNAALAIREE 476
+ + +E + A L ++E
Sbjct: 1680 KASVDIESLGIPAHLRKKDE 1699
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 240 KAELCGEQAKLELVANYNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVED 419
K L G++ K ++ P N + Q A + E+EE +L+ + +EFVE
Sbjct: 1620 KTSLLGDKRKQRRLSKSLRPQDMAGFENEEDLQDAADMEEEEESKSDLEDHSDEEEFVEK 1679
Query: 420 RTRI-VEETALNAALAIREE 476
+ + +E + A L ++E
Sbjct: 1680 KASVDIESLGIPAHLRKKDE 1699
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +3
Query: 300 HSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEV 479
HS +++ I+E T + E I Q+E ++E +E +I E A+ +
Sbjct: 47 HSECIAVPIIEGVTMLNEFESARSICGRQLERRVREQMEKYGQIAELNGERRAITENDWQ 106
Query: 480 SNDLAYLLDT 509
D L++T
Sbjct: 107 DIDACKLIET 116
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 147 NESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELV 281
NE + E+L++ N E+ L + E +D AEL Q +L+LV
Sbjct: 1584 NELTAKNQEILAELSNAEQTLQNSPLEDLDISAELDRLQMQLDLV 1628
>AC199158-8|ABO33283.1| 439|Caenorhabditis elegans Hypothetical
protein AC8.10 protein.
Length = 439
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 288 YNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETAL-NAALA 464
Y P ++ L +Q AV+ +EE I + +E +++ +E+R + + NAA +
Sbjct: 111 YEVPECNEDVYRPLNSQVAVKKFLKEEAIPHRTLEG-VRQVMEERGHHISTKQIQNAARS 169
Query: 465 IREEVSNDLAYLLDTTQ 515
+R+ V + L TT+
Sbjct: 170 VRDAVVGNTGPHLSTTE 186
>AC199158-4|ABO33286.1| 439|Caenorhabditis elegans Hypothetical
protein AC8.3 protein.
Length = 439
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 288 YNNPHSSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETAL-NAALA 464
Y P ++ L +Q AV+ +EE I + +E +++ +E+R + + NAA +
Sbjct: 111 YEVPECNEDVYRPLNSQVAVKKFLKEEAIPHRTLEG-VRQVMEERGHHISTKQIQNAARS 169
Query: 465 IREEVSNDLAYLLDTTQ 515
+R+ V + L TT+
Sbjct: 170 VRDAVVGNTGPHLSTTE 186
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 147 NESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELV 281
NE + E+L++ N E+ L + E +D AEL Q +L+LV
Sbjct: 1584 NELTAKNQEILAELSNAEQTLQNSPLEDLDISAELDRLQMQLDLV 1628
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 174 VLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLSMNILE 332
VL N+ + EA +E + S+ E CG K+E + N+ N +L+ I++
Sbjct: 424 VLDGINNILKMAGEA-AEQVTSEIEECGGLDKIENLQNHENEDIYKLAFEIID 475
>U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate
filament, d protein1, isoform b protein.
Length = 465
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +3
Query: 123 SKKFDLKQNESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPH 302
S+KF L QN+++ + + S + ++S+A DS + + ++E + +
Sbjct: 297 SEKFSLTQNQAREEVLRIRSLLNELRTKISDA-----DSMTQALSK--RIEDMKFREDEE 349
Query: 303 SSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVE-ETALNAALAIREEV 479
++ E + AV + E +++++E ++ + R+ I + A +R
Sbjct: 350 LRMFEQSLTEKELAVTRMRDECAKLSVELETLVENQINLRSEIAHYRKLMEQAENLRTSY 409
Query: 480 SNDLAYLLDT 509
+D +++DT
Sbjct: 410 QSD--FVIDT 417
>U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate
filament, d protein1, isoform a protein.
Length = 575
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +3
Query: 123 SKKFDLKQNESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPH 302
S+KF L QN+++ + + S + ++S+A DS + + ++E + +
Sbjct: 297 SEKFSLTQNQAREEVLRIRSLLNELRTKISDA-----DSMTQALSK--RIEDMKFREDEE 349
Query: 303 SSQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVE-ETALNAALAIREEV 479
++ E + AV + E +++++E ++ + R+ I + A +R
Sbjct: 350 LRMFEQSLTEKELAVTRMRDECAKLSVELETLVENQINLRSEIAHYRKLMEQAENLRTSY 409
Query: 480 SNDLAYLLDT 509
+D +++DT
Sbjct: 410 QSD--FVIDT 417
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 174 VLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLSMNILE 332
VL N+ + EA +E + S+ E CG K+E + N+ N +L+ I++
Sbjct: 424 VLDGINNILKMAGEA-AEQVTSEIEECGGLDKIENLQNHENEDIYKLAFEIID 475
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 174 VLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLSMNILE 332
VL N+ + EA +E + S+ E CG K+E + N+ N +L+ I++
Sbjct: 333 VLDGINNILKMAGEA-AEQVTSEIEECGGLDKIENLQNHENEDIYKLAFEIID 384
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 357 EQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAI 467
EQEE I N + + +KEFV D T + + L A+
Sbjct: 12 EQEENINNNNLPSIVKEFVSDYTGSIWDELLRQLTAL 48
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.2
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Frame = +3
Query: 42 PNFFTFGPFDQYKQLQELYLSHFDLYVSKKFDLKQNESKNDDNEVLSQAKNMERRLSEAL 221
P F F FD+ ++ E ++SH D +K F+ D NE + + L +
Sbjct: 90 PKEFNFTFFDETTKMLERFISHIDDISTKTFE--------DRNEQIYGS-----GLLKGF 136
Query: 222 SEYIDSKAELCGEQAKLELVANYNNPHSSQLSMNILEAQTAVQLLEQEEGII-NLQIENA 398
S S ++ + ++ ++NN + + N + + +L + G++ ++ EN
Sbjct: 137 SGEFQSVKKMIEKAMSVDKTTSFNNLINGPNTFNTISTMIELNVLRKNYGLVHSVAGENL 196
Query: 399 IK 404
IK
Sbjct: 197 IK 198
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/92 (22%), Positives = 44/92 (47%)
Frame = +3
Query: 69 DQYKQLQELYLSHFDLYVSKKFDLKQNESKNDDNEVLSQAKNMERRLSEALSEYIDSKAE 248
DQ +L++ H +L+ S +ES +DD+E+ + + LSE + +K
Sbjct: 389 DQINELEDEAF-HINLFQSSTESESDDESSSDDSEMSNDGDSSSSELSEKNLDEPTTKL- 446
Query: 249 LCGEQAKLELVANYNNPHSSQLSMNILEAQTA 344
+ + A + P+S++++ N + A T+
Sbjct: 447 INKNLENVAFRATSSVPNSARMNRNSVAAGTS 478
>Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.18 protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 500 QVREIVADFFSYS*RSVKRSFLNNTGAVFDKFFDSVLYL 384
Q+ E + DFF+ K+ F N+ G +F F+D+ +L
Sbjct: 142 QLTEEILDFFTG-----KKPFFNDAGHIFTYFYDAFFFL 175
>U23516-5|AAG38885.1| 449|Caenorhabditis elegans Glycosylation
related protein 13 protein.
Length = 449
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 188 SLTKYFVIIIFAFILFKIEFLTDIQIKVR 102
++TK F+I IF FIL+ + DI + R
Sbjct: 3 AVTKIFIIFIFVFILWTLYVENDITNRTR 31
>AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein.
Length = 458
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 72 QY-KQLQELYLSHFDLYVSKKFDLK-QNESKNDDNEVLSQAKN 194
QY + L +++++ F+ VSK+FD+K N+ K+ +E+ +N
Sbjct: 24 QYLRHLMKMFVADFETAVSKRFDVKFWNKLKSMMDEITKAMEN 66
>AF082010-1|AAD03022.1| 449|Caenorhabditis elegans
UDP-N-acetylglucosamine:a-3-D-mannosideb-1,
2-N-acetylglucosaminyltransferase I protein.
Length = 449
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 188 SLTKYFVIIIFAFILFKIEFLTDIQIKVR 102
++TK F+I IF FIL+ + DI + R
Sbjct: 3 AVTKIFIIFIFVFILWTLYVENDITNRTR 31
>AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid
transporter protein5, isoform b protein.
Length = 521
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 74 LIERTKSKEIWCCILFTTVP 15
L+ K +WCCILF +P
Sbjct: 447 LVALNKKVTLWCCILFDCLP 466
>AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid
transporter protein5, isoform a protein.
Length = 537
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 74 LIERTKSKEIWCCILFTTVP 15
L+ K +WCCILF +P
Sbjct: 447 LVALNKKVTLWCCILFDCLP 466
>AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 7 protein.
Length = 458
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 72 QY-KQLQELYLSHFDLYVSKKFDLK-QNESKNDDNEVLSQAKN 194
QY + L +++++ F+ VSK+FD+K N+ K+ +E+ +N
Sbjct: 24 QYLRHLMKMFVADFETAVSKRFDVKFWNKLKSMMDEITKAMEN 66
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +3
Query: 138 LKQNESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLS 317
++ N K+ V Q KNM++ + ++ + S + + +LE NN H
Sbjct: 583 MEMNTVKDVLQNVQKQLKNMQQNSEQFETKLVASDNKTKNFEKQLEDERRKNNKHLESSR 642
Query: 318 MNILEAQTAVQLLEQE-EGIINLQIENAIKEF 410
++ ++ L++ + N Q EN +F
Sbjct: 643 KTLISKNEQLEALKRRATALSNCQAENQTLKF 674
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +3
Query: 138 LKQNESKNDDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSSQLS 317
++ N K+ V Q KNM++ + ++ + S + + +LE NN H
Sbjct: 617 MEMNTVKDVLQNVQKQLKNMQQNSEQFETKLVASDNKTKNFEKQLEDERRKNNKHLESSR 676
Query: 318 MNILEAQTAVQLLEQE-EGIINLQIENAIKEF 410
++ ++ L++ + N Q EN +F
Sbjct: 677 KTLISKNEQLEALKRRATALSNCQAENQTLKF 708
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,175,494
Number of Sequences: 27780
Number of extensions: 175433
Number of successful extensions: 756
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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