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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323E01f
         (382 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical pr...    91   2e-19
Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical pr...    91   2e-19
AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical ...    80   5e-16
AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical ...    80   5e-16
AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical ...    70   5e-13
U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical pr...    69   2e-12
U80844-2|AAB37972.1|  134|Caenorhabditis elegans Hypothetical pr...    64   3e-11
Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical pr...    54   3e-08
U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical pr...    54   5e-08
Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical pr...    53   8e-08
U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical pr...    50   4e-07
U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical pr...    50   7e-07
Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical pr...    47   4e-06
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu...    29   1.1  
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu...    29   1.1  
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu...    29   1.1  
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu...    29   1.1  
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO...    29   1.1  
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR...    29   1.1  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    28   2.0  
Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U80023-14|AAG24047.2|  334|Caenorhabditis elegans Serpentine rec...    27   6.0  
AL132863-4|CAB60575.1|  410|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z73969-19|CAJ43440.1|  548|Caenorhabditis elegans Hypothetical p...    26   7.9  
Z73969-2|CAA98233.1|  611|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z73969-1|CAA98232.1|  589|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical
           protein C07D8.6 protein.
          Length = 317

 Score = 91.5 bits (217), Expect = 2e-19
 Identities = 50/112 (44%), Positives = 71/112 (63%)
 Frame = +3

Query: 42  MAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQD 221
           M+     I+L++G  +P++ LGT + +  E      V  AV  A++AGYR IDTA+VYQ+
Sbjct: 1   MSSATASIKLSNGVEMPVIGLGTWQSSPAE------VITAVKTAVKAGYRLIDTASVYQN 54

Query: 222 EEQVGQGIAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKLGLD 377
           EE +G  I E +  G+V REELF+TTK W  + A  K+   L+ESLKKL L+
Sbjct: 55  EEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLE 106


>Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical
           protein ZC443.1 protein.
          Length = 320

 Score = 91.1 bits (216), Expect = 2e-19
 Identities = 48/112 (42%), Positives = 72/112 (64%)
 Frame = +3

Query: 42  MAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQD 221
           M+ + P   L++G  +P + LGT + T +E  ++  +R AV     AGYRHIDTA +YQ+
Sbjct: 1   MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTV--IRNAVL----AGYRHIDTATLYQN 54

Query: 222 EEQVGQGIAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKLGLD 377
           E Q+G  +AE  A G++ RE++F+TTK +  + A D V  AL+ SLK+L LD
Sbjct: 55  EHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLD 106


>AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1b protein.
          Length = 316

 Score = 80.2 bits (189), Expect = 5e-16
 Identities = 39/90 (43%), Positives = 57/90 (63%)
 Frame = +3

Query: 63  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 242
           ++LN G +IP + LGT +          EV  A+  A+ AGYRHID A VYQ++++VG+ 
Sbjct: 5   LKLNSGYSIPAIGLGTWQSKP------GEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEA 58

Query: 243 IAEAIANGLVTREELFVTTKLWNDKHARDK 332
           + E +  G V REELF+T+K+WN  H+  K
Sbjct: 59  LKEILDEGKVKREELFITSKVWNTFHSEAK 88


>AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1a protein.
          Length = 316

 Score = 80.2 bits (189), Expect = 5e-16
 Identities = 39/90 (43%), Positives = 57/90 (63%)
 Frame = +3

Query: 63  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 242
           ++LN G +IP + LGT +          EV  A+  A+ AGYRHID A VYQ++++VG+ 
Sbjct: 5   LKLNSGYSIPAIGLGTWQSKP------GEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEA 58

Query: 243 IAEAIANGLVTREELFVTTKLWNDKHARDK 332
           + E +  G V REELF+T+K+WN  H+  K
Sbjct: 59  LKEILDEGKVKREELFITSKVWNTFHSEAK 88


>AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical
           protein Y39G8B.2 protein.
          Length = 339

 Score = 70.1 bits (164), Expect = 5e-13
 Identities = 36/103 (34%), Positives = 63/103 (61%)
 Frame = +3

Query: 54  APCIQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQV 233
           A  + LN G  +P++  GT +    ++ + + VR A    +EAGYRHID+A  ++++E+V
Sbjct: 4   ADTVTLNSGYEMPVIGYGTWQ--LPKNLAAERVRDA----LEAGYRHIDSALSFKNQEEV 57

Query: 234 GQGIAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLK 362
             GI +      V REELF+++K+WN  H+R++ +  + E L+
Sbjct: 58  AAGIKDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLE 100


>U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical
           protein T08H10.1 protein.
          Length = 333

 Score = 68.5 bits (160), Expect = 2e-12
 Identities = 41/105 (39%), Positives = 64/105 (60%)
 Frame = +3

Query: 63  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 242
           I LN G  +P+  LGT +   K+     E+  A+  A++AGYR IDTA +YQ+E  +G+ 
Sbjct: 6   IPLNTGAQLPLFGLGTWQ--VKDEA---ELTVALRAALDAGYRLIDTAHLYQNEHIIGKV 60

Query: 243 IAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKLGLD 377
           + E I++G + RE++FVT+KL    HA + V   ++  LK L L+
Sbjct: 61  LHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLE 105


>U80844-2|AAB37972.1|  134|Caenorhabditis elegans Hypothetical
           protein C07D8.5 protein.
          Length = 134

 Score = 64.1 bits (149), Expect = 3e-11
 Identities = 35/83 (42%), Positives = 53/83 (63%)
 Frame = +3

Query: 63  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 242
           + L++ +++P V LGT +  A      ++V  AV  A++ GY  IDTA+ Y +EE +G  
Sbjct: 48  LTLSNAHSMPAVGLGTWQSNA------EDVISAVKAAVKNGYSLIDTASGYNNEEFIGTA 101

Query: 243 IAEAIANGLVTREELFVTTKLWN 311
           I E IA G+V RE+LF+TTK+ N
Sbjct: 102 IKEVIAEGVVKREDLFITTKVPN 124


>Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical
           protein F53F1.2 protein.
          Length = 297

 Score = 54.0 bits (124), Expect = 3e-08
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 66  QLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGI 245
           +LN G  IP V  GT + T       + V  A+  A+ AGYR  DTA  Y +E+++G+ +
Sbjct: 14  KLNSGYNIPFVGFGTYKVTG------ENVPPAIDAALTAGYRMFDTAKYYLNEKELGEAL 67

Query: 246 AEAIANGLVTREELFVTTKLW-NDKHARDKVVPALQESLKKLGLD 377
              +    ++R ++F+T+K +   K+ R+     ++ESL+ L  D
Sbjct: 68  KILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTD 112


>U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical
           protein C35D10.6 protein.
          Length = 287

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
 Frame = +3

Query: 81  NTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIAEAI- 257
           N +P++ +GT +   +E      +RQ +    + GYR IDTA VY +E ++G+ + + + 
Sbjct: 9   NNMPLIGIGTWQVQKEEI-----LRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLP 63

Query: 258 ANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKLGLD 377
           ANGL  RE++++T+KL        K   +++ESL  L ++
Sbjct: 64  ANGL-KREDIWITSKLAPSNAGVKKARESIEESLSNLKVE 102


>Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical
           protein F53F1.3 protein.
          Length = 283

 Score = 52.8 bits (121), Expect = 8e-08
 Identities = 33/102 (32%), Positives = 54/102 (52%)
 Frame = +3

Query: 63  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 242
           I+LN G   P++ LGT +         D+V   +  A+ AGYR  DTA VY +E+++G  
Sbjct: 3   IKLNTGYDCPLIGLGTYKIIG------DQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDA 56

Query: 243 IAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKL 368
           +   +    + RE++F+TTK+    +  + V   + ESL  L
Sbjct: 57  LEILLPKHNLKREDIFITTKM--HPNTVENVKKLVDESLSLL 96


>U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical
           protein ZK1290.5 protein.
          Length = 321

 Score = 50.4 bits (115), Expect = 4e-07
 Identities = 37/107 (34%), Positives = 55/107 (51%)
 Frame = +3

Query: 57  PCIQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVG 236
           P   L++   +P++ LGT        D++      ++   + GYR IDTA  Y  E+Q+G
Sbjct: 3   PTTVLSNNVEMPLIGLGTTHSGGYYHDAV------LHSIKKCGYRLIDTAKRYGVEKQLG 56

Query: 237 QGIAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKLGLD 377
                A+ N  V REE+F++TKLW      D+V  A Q S +KL  D
Sbjct: 57  I----AVKNCSVPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTD 98


>U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical
           protein C01G5.5 protein.
          Length = 287

 Score = 49.6 bits (113), Expect = 7e-07
 Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
 Frame = +3

Query: 66  QLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGI 245
           +L +G  IP +ALGT           D++  AV  A++ GYR  DTA  Y++E+ +G  +
Sbjct: 3   KLKNGQEIPKLALGTYEAKG------DQLFAAVDEALKVGYRSFDTAKYYENEKDLGLAL 56

Query: 246 AEAIANGLVTREELFVTTKL--WNDKHARDKVVPALQESLKKL 368
              +    +  E++++T+K+  ++ K+A + +   + ESL+ L
Sbjct: 57  KTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELL 99


>Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical
           protein K07C5.2 protein.
          Length = 301

 Score = 47.2 bits (107), Expect = 4e-06
 Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 66  QLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGI 245
           + +DG  +P + LG  R   +    +D   +A   A+++GYR  DTA +Y++E  +G  +
Sbjct: 13  KFSDGYEMPKIGLGISR--IETQQDLDVSIEA---ALKSGYRQFDTANLYKNETFLGNSL 67

Query: 246 AEAIANGLVTREELFVTTKLWN-DKHARDKVVPALQESLKKLGLD 377
            + +    +TRE++F+TTK+   +++  ++    L  SL  L  D
Sbjct: 68  KKYLPQFGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTD 112


>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
           guidance protein 7,isoform a protein.
          Length = 1144

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 12  ITLTCLL----NAAMAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDE 149
           +TL C      NAA+  +AP I  + GN IP  A G G+    E  + +E
Sbjct: 279 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAEE 328


>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
           guidance protein 7,isoform d protein.
          Length = 1147

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 12  ITLTCLL----NAAMAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDE 149
           +TL C      NAA+  +AP I  + GN IP  A G G+    E  + +E
Sbjct: 279 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAEE 328


>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
           guidance protein 7,isoform b protein.
          Length = 1328

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 12  ITLTCLL----NAAMAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDE 149
           +TL C      NAA+  +AP I  + GN IP  A G G+    E  + +E
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAEE 512


>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
           guidance protein 7,isoform c protein.
          Length = 1331

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 12  ITLTCLL----NAAMAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDE 149
           +TL C      NAA+  +AP I  + GN IP  A G G+    E  + +E
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAEE 512


>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
           protein.
          Length = 1147

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 12  ITLTCLL----NAAMAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDE 149
           +TL C      NAA+  +AP I  + GN IP  A G G+    E  + +E
Sbjct: 279 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAEE 328


>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
           protein.
          Length = 1331

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 12  ITLTCLL----NAAMAVQAPCIQLNDGNTIPIVALGTGRGTAKESDSIDE 149
           +TL C      NAA+  +AP I  + GN IP  A G G+    E  + +E
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAEE 512


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 99  ALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 242
           A+G G G  +++ +     Q    A  AGY+    AAV  +++QVGQG
Sbjct: 177 AVGGGAGYQQQAPAQGAGYQQQAPAQGAGYQQQAPAAVVTEQQQVGQG 224


>Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical
           protein D2013.5 protein.
          Length = 934

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
 Frame = +3

Query: 75  DGNTIPIVALG-----TGRGTAKESDSIDEVRQ 158
           +G   P+ ALG     TGRG +  SDSIDE+R+
Sbjct: 486 EGKLFPMKALGYFGVVTGRGNS--SDSIDEIRK 516


>U80023-14|AAG24047.2|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein234 protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 341 RYNLVASVFVVPQFSSNKQLFSSDQSIGNGFS 246
           +Y +VAS  +VP +    Q    DQ IG  FS
Sbjct: 131 KYAIVASYVIVPLYYLPVQFVLPDQEIGREFS 162


>AL132863-4|CAB60575.1|  410|Caenorhabditis elegans Hypothetical
           protein Y37H2A.6 protein.
          Length = 410

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 243 IAEAIANGLVTREELFVTTKLWNDKHARDKVVPALQESLKKL 368
           +A+ I N  +  EEL + TK+ +++H R  +   L    K +
Sbjct: 180 MAQIIRNPKLELEELQIETKIQDEQHGRANIAEVLTRVFKPI 221


>Z73969-19|CAJ43440.1|  548|Caenorhabditis elegans Hypothetical
           protein C12D8.1c protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 169 QYTAWRTSSIESDSLAVPRPVPKATMGIVLP 77
           Q   W+ +S+ +   A P   P A  GIV P
Sbjct: 395 QVGGWQQNSVYAQQTAAPAAAPYAAAGIVQP 425


>Z73969-2|CAA98233.1|  611|Caenorhabditis elegans Hypothetical
           protein C12D8.1b protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 169 QYTAWRTSSIESDSLAVPRPVPKATMGIVLP 77
           Q   W+ +S+ +   A P   P A  GIV P
Sbjct: 458 QVGGWQQNSVYAQQTAAPAAAPYAAAGIVQP 488


>Z73969-1|CAA98232.1|  589|Caenorhabditis elegans Hypothetical
           protein C12D8.1a protein.
          Length = 589

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 169 QYTAWRTSSIESDSLAVPRPVPKATMGIVLP 77
           Q   W+ +S+ +   A P   P A  GIV P
Sbjct: 436 QVGGWQQNSVYAQQTAAPAAAPYAAAGIVQP 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,479,823
Number of Sequences: 27780
Number of extensions: 151710
Number of successful extensions: 468
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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