Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323D12f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044...    50   1e-06
05_04_0342 - 20425141-20425311,20425415-20425558,20426506-204266...    50   1e-06
02_05_0567 + 30029862-30030136,30030299-30030384,30031663-300318...    49   2e-06
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285...    49   3e-06
07_01_0861 + 7152976-7153061,7153222-7153310,7154862-7155013,715...    48   5e-06
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466...    48   5e-06
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750...    48   6e-06
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     45   3e-05
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496...    37   0.009
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133...    30   1.3  
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750...    28   5.2  
03_06_0395 + 33616304-33616494,33616863-33617095,33617213-336173...    27   6.9  

>01_06_1593 +
           38502884-38502993,38503580-38503665,38504352-38504497,
           38504817-38504933,38505028-38505144,38505858-38506001,
           38506099-38506251
          Length = 290

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 17/36 (47%), Positives = 30/36 (83%)
 Frame = +3

Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           ++P +NFVG+LLGP+GN++K+++  T C++ + GRG
Sbjct: 150 KYPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRG 185


>05_04_0342 -
           20425141-20425311,20425415-20425558,20426506-20426622,
           20426719-20426835,20427533-20427678,20428208-20428293,
           20428780-20428889
          Length = 296

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 17/36 (47%), Positives = 30/36 (83%)
 Frame = +3

Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           ++P +NFVG+LLGP+GN++K+++  T C++ + GRG
Sbjct: 150 KYPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRGRG 185


>02_05_0567 +
           30029862-30030136,30030299-30030384,30031663-30031811,
           30032581-30032685,30032779-30032895,30033251-30033394,
           30033519-30033668
          Length = 341

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 17/36 (47%), Positives = 30/36 (83%)
 Frame = +3

Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           ++P FNFVG++LGP+GN++K+++  T C++ + GRG
Sbjct: 202 KYPTFNFVGRILGPRGNSLKRVEATTDCRVLIRGRG 237


>05_05_0237 -
           23526613-23527178,23527979-23528066,23528384-23528527,
           23528674-23528790,23528860-23528970,23530911-23531062,
           23531362-23531450,23531664-23531761
          Length = 454

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 16/35 (45%), Positives = 29/35 (82%)
 Frame = +3

Query: 417 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           +P FNF+G+LLGP+GN++K+++  T C++ + G+G
Sbjct: 148 YPNFNFIGRLLGPRGNSLKRIEASTGCRVFIRGKG 182


>07_01_0861 +
           7152976-7153061,7153222-7153310,7154862-7155013,
           7155254-7155382,7155465-7155581,7156353-7156496,
           7156749-7156851,7157471-7157565,7157953-7158096
          Length = 352

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 16/35 (45%), Positives = 29/35 (82%)
 Frame = +3

Query: 417 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           +P FNFVG++LGP+GN++K+++  T C++ + G+G
Sbjct: 150 YPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 184


>01_06_1141 +
           34845834-34845931,34846110-34846198,34846535-34846686,
           34847473-34847583,34847702-34847818,34847989-34848156,
           34848563-34848703
          Length = 291

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 16/35 (45%), Positives = 29/35 (82%)
 Frame = +3

Query: 417 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           +P FNF+G+LLGP+GN++K+++  T C++ + G+G
Sbjct: 148 YPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRGKG 182



 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 216 AGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA 323
           AG+Y+ ELL E+ K+       P+  +L++QE+ ++ A
Sbjct: 32  AGQYLAELLQEQQKIGPFVQVLPICGRLLNQEIMRMSA 69


>03_06_0443 +
           33973229-33973311,33973422-33973510,33974873-33975024,
           33975463-33975579,33975729-33975776,33976169-33976312,
           33976715-33976858
          Length = 258

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 16/35 (45%), Positives = 29/35 (82%)
 Frame = +3

Query: 417 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           H +FNFVG++LGP+GN++K+++  T C++ + G+G
Sbjct: 106 HQEFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 140


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 45.2 bits (102), Expect = 3e-05
 Identities = 15/36 (41%), Positives = 28/36 (77%)
 Frame = +3

Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
           E P +NF+G ++GP+GNT K+++++T  K+ + G+G
Sbjct: 105 EFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKG 140


>08_01_0005 +
           47929-48201,48663-48788,49009-49054,49188-49270,
           49651-49728,49831-49884,50004-50138,50222-51691
          Length = 754

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 417 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLG 515
           +P  N +G L+GP+ N  K+LQE+T  K+ V G
Sbjct: 180 YPGHNIIGVLMGPESNAQKRLQEETGAKIRVYG 212


>02_01_0198 +
           1334563-1334994,1335872-1335919,1336096-1336351,
           1336733-1336881,1336969-1337097,1337425-1337592,
           1338416-1338610
          Length = 458

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +3

Query: 435 VGKLLGPKGNTMKQLQEDTLCKMAVL 512
           VG L+G +G+T+K+L EDT  ++ VL
Sbjct: 108 VGGLIGRRGDTIKRLCEDTRARVRVL 133


>01_01_0956 +
           7505206-7505322,7505860-7506723,7506841-7507260,
           7508091-7508342,7508696-7508953,7509798-7509877,
           7509959-7510070,7510492-7510541,7511070-7511171,
           7511215-7511276,7511888-7511928
          Length = 785

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 435 VGKLLGPKGNTMKQLQEDTLCKMAV 509
           VG LLG  G+ +KQ+  D+ C++ V
Sbjct: 286 VGWLLGKNGSVIKQMSTDSCCEIRV 310


>03_06_0395 +
           33616304-33616494,33616863-33617095,33617213-33617303,
           33617882-33617930,33618123-33618214,33618285-33618398,
           33618473-33619172,33619269-33619336,33619626-33619760,
           33619862-33620079,33620169-33620593
          Length = 771

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +3

Query: 255 KLNNSKFPLSMKLI--DQEVTKVQASGRITKDSKYVDVFRD 371
           K  N  F L  KL+  D  V + +  GR T+D  +VD  RD
Sbjct: 515 KPGNHNFELLKKLVLPDGSVLRARLPGRPTRDCLFVDPARD 555


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,758,468
Number of Sequences: 37544
Number of extensions: 196002
Number of successful extensions: 437
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)