Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323D12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, R... 86 6e-17
AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein. 86 6e-17
AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyros... 86 6e-17
BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein. 85 1e-16
AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyros... 83 6e-16
M88108-1|AAA59990.1| 443|Homo sapiens p62 protein. 81 2e-15
BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, R... 81 2e-15
BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein. 81 2e-15
BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, R... 81 2e-15
AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, R... 81 2e-15
AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, R... 81 2e-15
AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens ... 81 2e-15
Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA... 81 3e-15
BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, R... 81 3e-15
AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian pr... 81 3e-15
AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, R... 81 3e-15
AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, R... 81 3e-15
AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, R... 81 3e-15
AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, R... 81 3e-15
AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, R... 81 3e-15
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 52 1e-06
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 52 1e-06
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 52 1e-06
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 52 1e-06
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 52 1e-06
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 52 1e-06
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 52 1e-06
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 52 1e-06
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 52 1e-06
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 52 1e-06
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 52 1e-06
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 52 1e-06
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 52 1e-06
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 52 1e-06
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 52 1e-06
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 52 1e-06
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 52 1e-06
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 52 1e-06
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 52 1e-06
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 52 1e-06
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 52 1e-06
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 52 1e-06
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 49 1e-05
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 49 1e-05
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 49 1e-05
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 49 1e-05
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 49 1e-05
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 49 1e-05
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 49 1e-05
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 49 1e-05
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 49 1e-05
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 49 1e-05
AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1 pro... 49 1e-05
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 33 0.80
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 33 0.80
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 33 0.80
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 33 0.80
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 33 0.80
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 33 0.80
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 33 0.80
BC012291-1|AAH12291.1| 357|Homo sapiens ASCC1 protein protein. 30 5.7
AL607035-3|CAI15908.1| 403|Homo sapiens novel protein (CGI-18) ... 30 5.7
AL607035-2|CAI15907.1| 357|Homo sapiens novel protein (CGI-18) ... 30 5.7
AK094170-1|BAC04299.1| 400|Homo sapiens protein ( Homo sapiens ... 30 5.7
AL590543-2|CAI10942.1| 441|Homo sapiens protein ( Human DNA seq... 29 7.5
AK022972-1|BAB14339.1| 441|Homo sapiens protein ( Homo sapiens ... 29 7.5
>BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 3 protein.
Length = 346
Score = 86.2 bits (204), Expect = 6e-17
Identities = 43/100 (43%), Positives = 66/100 (66%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 401
+Y+ EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 402 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+G
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKG 101
>AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein.
Length = 346
Score = 86.2 bits (204), Expect = 6e-17
Identities = 43/100 (43%), Positives = 66/100 (66%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 401
+Y+ EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 402 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+G
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKG 101
>AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyrosine
protein alpha protein.
Length = 346
Score = 86.2 bits (204), Expect = 6e-17
Identities = 43/100 (43%), Positives = 66/100 (66%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 401
+Y+ EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 402 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+G
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKG 101
>BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein.
Length = 345
Score = 85.4 bits (202), Expect = 1e-16
Identities = 43/100 (43%), Positives = 66/100 (66%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 401
+Y+ EL++EK L+ S F +++L++QE+ K Q K+ KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQKGEG--KEEKYIDVVINKNMKLGQKVL 60
Query: 402 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+G
Sbjct: 61 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKG 100
>AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyrosine
protein beta protein.
Length = 264
Score = 83.0 bits (196), Expect = 6e-16
Identities = 42/96 (43%), Positives = 63/96 (65%)
Frame = +3
Query: 234 ELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXX 413
EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 1 ELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVLIPVK 58
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+G
Sbjct: 59 QFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKG 94
>M88108-1|AAA59990.1| 443|Homo sapiens p62 protein.
Length = 443
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
>BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
>BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein.
Length = 381
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
>BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
>AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
>AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
>AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ34027 fis, clone FCBBF2003549, highly similar to
GAP-associated tyrosine phosphoprotein p62 (Sam68). ).
Length = 418
Score = 81.4 bits (192), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 383
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 73 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 130
Query: 384 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+G
Sbjct: 131 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 176
>Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian
protein 1 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VPIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 80.6 bits (190), Expect = 3e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +3
Query: 222 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 395
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 396 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+G
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKG 105
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 44 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 79
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 123
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 74 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 109
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 149
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 123
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 123
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 149
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 149
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 123
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 414 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+G
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 214 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 273
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 274 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 306
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1
protein.
Length = 295
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +3
Query: 243 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 422
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 423 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRG 521
+ NFVG L+GP+GNT+K ++++ K+ + G+G
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG 181
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 147 NFVGRLIGKEGRNLKKVEQDTETKITI 173
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITI 312
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.80
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NFVGKLLGPKGNTMKQLQEDTLCKMAV 509
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITI 312
>BC012291-1|AAH12291.1| 357|Homo sapiens ASCC1 protein protein.
Length = 357
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 135 DFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTK 314
+F + + GKP E++ G E +N+ G M ++L K+ + + L +L+D+ + +
Sbjct: 206 EFINDISGGKPLEVEMAGIE--YMNDDPG--MVDVLYAKVHMKDGSNRLQ-ELVDRVLER 260
Query: 315 VQASGRITKD 344
QASG I K+
Sbjct: 261 FQASGLIVKE 270
>AL607035-3|CAI15908.1| 403|Homo sapiens novel protein (CGI-18)
protein.
Length = 403
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 135 DFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTK 314
+F + + GKP E++ G E +N+ G M ++L K+ + + L +L+D+ + +
Sbjct: 237 EFINDISGGKPLEVEMAGIE--YMNDDPG--MVDVLYAKVHMKDGSNRLQ-ELVDRVLER 291
Query: 315 VQASGRITKD 344
QASG I K+
Sbjct: 292 FQASGLIVKE 301
>AL607035-2|CAI15907.1| 357|Homo sapiens novel protein (CGI-18)
protein.
Length = 357
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 135 DFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTK 314
+F + + GKP E++ G E +N+ G M ++L K+ + + L +L+D+ + +
Sbjct: 206 EFINDISGGKPLEVEMAGIE--YMNDDPG--MVDVLYAKVHMKDGSNRLQ-ELVDRVLER 260
Query: 315 VQASGRITKD 344
QASG I K+
Sbjct: 261 FQASGLIVKE 270
>AK094170-1|BAC04299.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ36851 fis, clone ASTRO2014363. ).
Length = 400
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 135 DFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTK 314
+F + + GKP E++ G E +N+ G M ++L K+ + + L +L+D+ + +
Sbjct: 234 EFINDISGGKPLEVEMAGIE--YMNDDPG--MVDVLYAKVHMKDGSNRLQ-ELVDRVLER 288
Query: 315 VQASGRITKD 344
QASG I K+
Sbjct: 289 FQASGLIVKE 298
>AL590543-2|CAI10942.1| 441|Homo sapiens protein ( Human DNA
sequence from clone RP11-108N8 on chromosome 6 Contains
the 5' end of the RMND1 gene for required for meiotic
nuclear ).
Length = 441
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 162 KPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEV 308
K E +++GEEG++ +KA + +L +E ++ + PL K +D ++
Sbjct: 40 KSEFFEKHGEEGVEAEKKAISLLSKLRNE-LQTDKPFIPLVEKFVDTDI 87
>AK022972-1|BAB14339.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ12910 fis, clone NT2RP2004412. ).
Length = 441
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 162 KPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEV 308
K E +++GEEG++ +KA + +L +E ++ + PL K +D ++
Sbjct: 40 KSEFFEKHGEEGVEAEKKAISLLSKLRNE-LQTDKPFIPLVEKFVDTDI 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,574,604
Number of Sequences: 237096
Number of extensions: 1135385
Number of successful extensions: 2542
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 2500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2542
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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