Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323D07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 142 2e-35
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 99 2e-22
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 84 1e-17
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 81 7e-17
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 78 9e-16
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 63 2e-11
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 62 4e-11
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 62 6e-11
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 60 1e-10
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 57 1e-09
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 52 7e-08
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 50 2e-07
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 50 3e-07
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 49 5e-07
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 48 8e-07
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 44 1e-05
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 43 3e-05
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 43 3e-05
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 40 3e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 40 3e-04
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 29 0.32
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 29 0.56
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 3.0
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 26 3.0
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 25 9.0
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 25 9.0
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 142 bits (345), Expect = 2e-35
Identities = 73/169 (43%), Positives = 94/169 (55%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQVYDLYXXX 182
L V AS++E+K+ Y KLA ++HPDKNP AGDKFKEIS AYE+L+D +KR YD +
Sbjct: 11 LNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDRFGEE 70
Query: 183 XXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTMHPLAVTLEDLYAGK 362
AD++ P +G+D +H + VTLEDLY GK
Sbjct: 71 GLQGGGADGGMSADDLFASFFGGGMFGGGMPRG-----PRKGKDLVHTIKVTLEDLYRGK 125
Query: 363 TTKLQLSKNVICAHCKGVGGKPGSLISCKDCRGQGIKVSYQQIAPHMTR 509
TTKL L K VIC C G GGK GS+ SC C G G+K + + P + R
Sbjct: 126 TTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGPMIQR 174
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 99 bits (238), Expect = 2e-22
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKRQVYD 167
L V AS EIK++Y +LA HPDK P A ++F+ + AY++L DP+ R++YD
Sbjct: 11 LEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESREMYD 70
Query: 168 LYXXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTMHPLAVTLED 347
+Y D++ RG D +H ++LED
Sbjct: 71 MYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVIHDYEISLED 130
Query: 348 LYAGKTTKLQLSKNVICAHCKGVGGKP-GSLISCKDCRGQGIKVSYQQIAPH 500
++ GK KL+ ++N +C C+G GGK C C G+G+K + + PH
Sbjct: 131 MFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVGPH 182
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 381 SKNVICAHCKGVGGKPGSLISCKDCRGQG 467
+ VIC C G G CK C+G G
Sbjct: 186 NSQVICDTCNGKGVSFRGKDRCKHCKGSG 214
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 84.2 bits (199), Expect = 1e-17
Identities = 59/184 (32%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVYDLY 173
LGVSK+ASESEI++ Y +L K++HPDKNP A +KF EI+ A+EVLSDP++R++YD Y
Sbjct: 12 LGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDAY 71
Query: 174 ------XXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTMHPLAV 335
FP RG + +
Sbjct: 72 GEEGLNGQPGGPGGGPGEGFPGGGFGFDPFGDIFDNIFGGRRRQNAVR-RGPSMEQIVQI 130
Query: 336 TLEDLYAGKTTKLQLSKNVICAHCKGVGGKP-----GSLISCKDCRGQGIKVSYQQIAPH 500
L Y G + L++ C+ C G G P ++ SC C G G +V IAP
Sbjct: 131 HLSSFYTGGSFTLEIPVKRTCSVCSGQGFNPKYSADKAIESCPVCGGSGFRVIEHMIAPG 190
Query: 501 MTRQ 512
+Q
Sbjct: 191 FRQQ 194
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 81.4 bits (192), Expect = 7e-17
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNP--AAGDKFKEISYAYEVLSDPKKRQVYDLY 173
LGVSK+AS SEIK Y+KLAK++HPD NP AA DKF EI AYEVL DPKK++ +D Y
Sbjct: 91 LGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFDTY 149
Score = 34.7 bits (76), Expect = 0.008
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 306 GEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLIS-CKDCRGQGIKVSY 482
GED + + + G L S + C+ C G G +PGS S C C+G G ++ +
Sbjct: 210 GEDIEASITIDFMEAVRGAKKDLSYSVSSTCSSCHGSGLQPGSHKSTCFACKGTGQRLHF 269
Query: 483 QQIAPHM 503
+ HM
Sbjct: 270 IPPSFHM 276
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 77.8 bits (183), Expect = 9e-16
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQVYDLY 173
L V ASE+E+K+ Y KLA ++HPDKNP KFKEIS AYEVLSDP++R++YD Y
Sbjct: 11 LEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQY 67
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 63.3 bits (147), Expect = 2e-11
Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKRQVYD 167
LG+ K+A+ +IK +Y++L++ FHPD++ A A +KF+ I +AYEVLSDP K+++YD
Sbjct: 13 LGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKEIYD 72
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 62.5 bits (145), Expect = 4e-11
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSDPKKRQVYDL 170
LG+S +A+ +IK+ Y KLA ++HPDKNP A +KF++IS AY+VL D K R YD
Sbjct: 13 LGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQ 72
Query: 171 Y 173
+
Sbjct: 73 F 73
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 61.7 bits (143), Expect = 6e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVYD 167
LGVSK A++ EIK+ Y KLA +HPDKN A +FKE+ AY +LSDP+ R+ +D
Sbjct: 354 LGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRFD 411
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 60.5 bits (140), Expect = 1e-10
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQVYD 167
L + K +++EIK++Y KLA + HPDKN P+A + FK +S A++VLSDP R YD
Sbjct: 118 LDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYD 174
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 57.2 bits (132), Expect = 1e-09
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKN----PAAGDKFKEISYAYEVLSDPKKRQVYD 167
L +S +A IK++Y +LA +HPDKN AA +KF++++ AY+VLSDPK R+ YD
Sbjct: 14 LNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYD 72
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 51.6 bits (118), Expect = 7e-08
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQVYD 167
L + KNA+ +I++ Y LA ++HPD+NP A +F+ + A+EVLSD KR +YD
Sbjct: 17 LKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLIYD 75
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQVYD 167
LG++++A + EI R + K + ++HPDKN P A +KF + AY L D + R+ YD
Sbjct: 14 LGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAYD 71
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 49.6 bits (113), Expect = 3e-07
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQVYD 167
L V+ ++ EIK NY KLA ++HPD+NP D F +I+ AY +LS+ KR+ ++
Sbjct: 14 LQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWHE 71
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 48.8 bits (111), Expect = 5e-07
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPAAG----DKFKEISYAYEVLSDPKKRQVYD 167
LG +S EI++ Y KL +HPD+NP +F+ I A+EVL DPK R+++D
Sbjct: 17 LGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRELFD 75
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 48.0 bits (109), Expect = 8e-07
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPD------KNPAAGDKFKEISYAYEVLSDPKKRQVY 164
LGV K+AS+ I+R Y K A + HPD K A +F +++ AY VLSD K+R+ Y
Sbjct: 36 LGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRRKHY 95
Query: 165 D 167
D
Sbjct: 96 D 96
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 44.4 bits (100), Expect = 1e-05
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDK-----NPAAGDKFK---EISYAYEVLSDPKKRQ 158
LG++K S +++R+Y +L+ +FHPDK N + K EI+ AY L+D K R+
Sbjct: 103 LGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKTRE 162
Query: 159 VYDLY 173
Y LY
Sbjct: 163 NYALY 167
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 42.7 bits (96), Expect = 3e-05
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Frame = +3
Query: 3 LGVSK---NASESEIKRNYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPKKRQ 158
LG+SK A +IK+ + K + HPDK A+G+ FK I AYE+LSDP +R+
Sbjct: 102 LGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPVRRR 161
Query: 159 VYD 167
+D
Sbjct: 162 QFD 164
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 42.7 bits (96), Expect = 3e-05
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDK-NPA----AGDKFKEISYAYEVLSDPKKRQVYD 167
L ++ AS EIK Y K A E HPD+ +P+ A ++F+ ++ AY VLSD +R YD
Sbjct: 9 LNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRAQYD 68
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 39.5 bits (88), Expect = 3e-04
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 15 KNASESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVYDL 170
K ++ EIK Y K FHPDK P+ ++ AY+VLS K RQ Y +
Sbjct: 13 KTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQQYQI 67
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 39.5 bits (88), Expect = 3e-04
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQVYDLY 173
L V AS EI R Y K + +HPDKNP + + + + +L + + R+ YD +
Sbjct: 45 LEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRNTETRKRYDYF 101
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 29.5 bits (63), Expect = 0.32
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVYD 167
L + S +I+ Y K + HPDK NP A D F + A L + K R+ D
Sbjct: 36 LDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESLD 93
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 28.7 bits (61), Expect = 0.56
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 3 LGVSKNASESEIKRNYHKLAKEFHPDK 83
L + + + ++IKR Y +L K+ HPDK
Sbjct: 37 LELPRTCTANDIKRKYIELVKKHHPDK 63
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 18 NASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQV 161
N + + RN H +K HP+ + + + + S LS PK+R V
Sbjct: 600 NKFPNSVSRNTHFESKSPHPNYSRTPHETYSKASSKNVPLSPPKQRVV 647
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -1
Query: 113 FFKFITSCRIFVRV---ELFSKFVVISF 39
FFKF+ +C IF + EL SKF + S+
Sbjct: 100 FFKFLKTCAIFYQTCISELISKFQLDSY 127
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 36 IKRNYHKLAKEFHPDKNPAAG 98
+K N+ LA +FHP+K+ +AG
Sbjct: 179 VKNNF--LATQFHPEKSGSAG 197
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 252 GYQRNYQKFHQPET 211
G++ N +FHQPET
Sbjct: 203 GFESNSDEFHQPET 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,160,685
Number of Sequences: 5004
Number of extensions: 43370
Number of successful extensions: 163
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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