Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323D06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen pr... 66 9e-11
BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome, ma... 64 3e-10
BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome, ma... 64 3e-10
BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome, ma... 64 3e-10
BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome, ma... 64 3e-10
CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein. 62 2e-09
D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA2... 48 2e-05
CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein. 48 2e-05
CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein. 48 2e-05
BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome, ma... 48 2e-05
BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome, ma... 48 2e-05
BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome, ma... 48 2e-05
AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing... 48 2e-05
AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA... 48 2e-05
U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein. 45 1e-04
L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein. 45 1e-04
CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein. 45 1e-04
CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein. 45 1e-04
BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome, ma... 45 1e-04
BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome, ma... 45 1e-04
BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome, ma... 45 1e-04
AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA... 45 1e-04
AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein. 31 2.4
U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein. 31 3.2
U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia pro... 31 3.2
U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein. 31 3.2
AY220758-1|AAO26044.1| 2756|Homo sapiens ataxia telangiectasia m... 31 3.2
BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein. 30 5.7
AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein pr... 30 5.7
AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein pr... 30 5.7
AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein myop... 30 5.7
AK027343-1|BAB55048.1| 507|Homo sapiens .117). protein. 30 5.7
AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein. 30 5.7
AY129465-1|AAM93492.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AY092083-1|AAM18186.1| 3396|Homo sapiens TIG multiple domains-1 ... 29 7.5
AY074797-1|AAL74290.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AL590391-2|CAH72782.1| 3396|Homo sapiens polycystic kidney and h... 29 7.5
AL590391-1|CAH72781.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AL391221-2|CAI16677.1| 3396|Homo sapiens polycystic kidney and h... 29 7.5
AL391221-1|CAI16676.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AL355997-1|CAI20233.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AL157774-2|CAH73868.1| 3396|Homo sapiens polycystic kidney and h... 29 7.5
AL157774-1|CAH73867.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AL121946-2|CAI20325.1| 3396|Homo sapiens polycystic kidney and h... 29 7.5
AL121946-1|CAI20324.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
AF480064-1|AAM44232.1| 4074|Homo sapiens polycystic kidney and h... 29 7.5
U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen pr... 29 9.9
>U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen
protein.
Length = 267
Score = 65.7 bits (153), Expect = 9e-11
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ + KAE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSKAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 417 NNE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
N+ P K++RLD E +GT+V+V+PNG
Sbjct: 74 NSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNG 107
>BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 64.1 bits (149), Expect = 3e-10
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 417 NNE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
N+ P K++RLD E +GT+V+V+PNG
Sbjct: 74 NSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNG 107
>BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 64.1 bits (149), Expect = 3e-10
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 417 NNE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
N+ P K++RLD E +GT+V+V+PNG
Sbjct: 74 NSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNG 107
>BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 64.1 bits (149), Expect = 3e-10
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 417 NNE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
N+ P K++RLD E +GT+V+V+PNG
Sbjct: 74 NSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNG 107
>BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 64.1 bits (149), Expect = 3e-10
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 417 NNE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
N+ P K++RLD E +GT+V+V+PNG
Sbjct: 74 NSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNG 107
>CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein.
Length = 254
Score = 61.7 bits (143), Expect = 2e-09
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ + +AE + FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDWVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 417 NNE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
N+ P K++RLD E +GT+V+V+PNG
Sbjct: 74 NSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNG 107
>D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA28
suunit beta protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing
protein 22 protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA28
beta protein.
Length = 239
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
QV+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 417 NNEPNAKRQR 446
+ K+++
Sbjct: 76 DEMETDKQEK 85
>U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA28
alpha protein.
Length = 249
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 416
+V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 417 NNEPNAKRQRLDSSE 461
E K+Q + +
Sbjct: 73 EKEERKKQQEKEDKD 87
>AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein.
Length = 1307
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/88 (23%), Positives = 39/88 (44%)
Frame = +3
Query: 252 KDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K+SL K + ++ +K K+ + LE + + + + +P+PTPP EP
Sbjct: 351 KESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAVSLAE---LPLPTPPPAPPPEPE 407
Query: 432 AKRQRLDSSELSSNSTIEGTRVYVLPNG 515
+++ S S T +G P+G
Sbjct: 408 KEKEIHQSHVPSKTPTAKGKPQSEAPHG 435
>U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 231 VFQVQDYKDSLKLKAEHLIIKGFPEKIVK----LNELLETSNFQNRNLSDVHQDLNIPIP 398
V+ + ++ L + +HL I PE +V+ L+E +S Q+ +L D DL+ P P
Sbjct: 1318 VYDMLKSENLLGKQIDHLFISNLPEIVVELLMTLHEPANSSASQSTDLCDFSGDLD-PAP 1376
Query: 399 TPP 407
PP
Sbjct: 1377 NPP 1379
>U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia protein.
Length = 3056
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 231 VFQVQDYKDSLKLKAEHLIIKGFPEKIVK----LNELLETSNFQNRNLSDVHQDLNIPIP 398
V+ + ++ L + +HL I PE +V+ L+E +S Q+ +L D DL+ P P
Sbjct: 1318 VYDMLKSENLLGKQIDHLFISNLPEIVVELLMTLHEPANSSASQSTDLCDFSGDLD-PAP 1376
Query: 399 TPP 407
PP
Sbjct: 1377 NPP 1379
>U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 231 VFQVQDYKDSLKLKAEHLIIKGFPEKIVK----LNELLETSNFQNRNLSDVHQDLNIPIP 398
V+ + ++ L + +HL I PE +V+ L+E +S Q+ +L D DL+ P P
Sbjct: 1318 VYDMLKSENLLGKQIDHLFISNLPEIVVELLMTLHEPANSSASQSTDLCDFSGDLD-PAP 1376
Query: 399 TPP 407
PP
Sbjct: 1377 NPP 1379
>AY220758-1|AAO26044.1| 2756|Homo sapiens ataxia telangiectasia
mutated (includes complementation groups A, C and D)
protein.
Length = 2756
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 231 VFQVQDYKDSLKLKAEHLIIKGFPEKIVK----LNELLETSNFQNRNLSDVHQDLNIPIP 398
V+ + ++ L + +HL I PE +V+ L+E +S Q+ +L D DL+ P P
Sbjct: 1318 VYDMLKSENLLGKQIDHLFISNLPEIVVELLMTLHEPANSSASQSTDLCDFSGDLD-PAP 1376
Query: 399 TPP 407
PP
Sbjct: 1377 NPP 1379
>BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein.
Length = 658
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein
protein.
Length = 1391
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 250 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 296
>AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein
protein.
Length = 1320
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1320
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AK027343-1|BAB55048.1| 507|Homo sapiens .117). protein.
Length = 507
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein.
Length = 1320
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AY129465-1|AAM93492.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AY092083-1|AAM18186.1| 3396|Homo sapiens TIG multiple domains-1
protein.
Length = 3396
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AY074797-1|AAL74290.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL590391-2|CAH72782.1| 3396|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 3396
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL590391-1|CAH72781.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL391221-2|CAI16677.1| 3396|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 3396
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL391221-1|CAI16676.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL355997-1|CAI20233.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL157774-2|CAH73868.1| 3396|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 3396
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL157774-1|CAH73867.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL121946-2|CAI20325.1| 3396|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 3396
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AL121946-1|CAI20324.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>AF480064-1|AAM44232.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 424 SQMLNVKDWTHLSYPATQP*KELGSMYC 507
++ML +KD +P+ QP K+LG + C
Sbjct: 3314 TRMLKIKDKNKFYFPSLQPRKDLGKVVC 3341
>U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen
protein.
Length = 54
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 426 PNAKRQRLDSSELSSNSTIEGTRVYVLPNG 515
P K++RLD E +GT+V+V+PNG
Sbjct: 1 PTYKKRRLDECE----KAFQGTKVFVMPNG 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,347,676
Number of Sequences: 237096
Number of extensions: 1402651
Number of successful extensions: 3350
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3344
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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