Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323D06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical ... 51 4e-07
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 30 1.2
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 29 2.0
Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical ... 29 2.7
U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family pr... 27 6.2
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 27 8.1
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 27 8.1
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 27 8.1
U80843-1|AAB37966.1| 410|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical pr... 27 8.1
U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kina... 27 8.1
U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kina... 27 8.1
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 8.1
AB016838-1|BAA77824.4| 432|Caenorhabditis elegans Ca2+/calmodul... 27 8.1
>AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical
protein Y66D12A.9 protein.
Length = 248
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Frame = +3
Query: 237 QVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQD--LNIPIPTP-- 404
++ +YK L +AE L+ + FP+K+++ + LL++ L+++ D LNIPIP
Sbjct: 12 ELVEYKQKLFAEAERLVKEEFPKKVIEFDALLKSPKLSYDRLAEILPDKSLNIPIPDALN 71
Query: 405 PATSNNEPNAKRQRLD 452
T ++EP KRQR+D
Sbjct: 72 GTTDSDEPAVKRQRVD 87
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 336 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNS 476
T+N + + P+PTPP T+ +E + D + L+ NS
Sbjct: 492 TANQTGSTDGTITSGIQSPVPTPPVTNEHESQRSSRLSDFTNLAGNS 538
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 315 KLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNST 479
K + L+ S+ RN S V ++ + P P PP S +P + Q L E + ++
Sbjct: 123 KSDSSLDISSLTGRNSSSVLEECSSPSPVPPPRS-PKPKKRTQFLTEEETDAETS 176
>Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 348 QNRNLSDVHQDLNIPIPTPPATSNNEPN 431
QN N+S+VH ++I PT NN N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 336 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 482
T F N + Q L +P PP T N + +R RLD+ S++S+I
Sbjct: 274 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 320
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 336 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 482
T F N + Q L +P PP T N + +R RLD+ S++S+I
Sbjct: 275 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 321
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 463 NSDESSL*RLAFGSLFDV-AGGVGIGMFKS*CTSDKFRF 350
NSD+ S+ + G D GG+ + +F S TS+K+RF
Sbjct: 9 NSDKYSI-KSVLGKFCDTNCGGINVSLFVSETTSNKYRF 46
>AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 348 QNRNLSDVHQDLNIPIPTPPATSNNEPN 431
QN N+S+VH ++I PT NN N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151
>U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family
protein 7 protein.
Length = 327
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 354 RNLSDVHQ-DLNIPIPTPPATSNNEPNAKRQR 446
RN+ V + +N I TPPA+ + EP KR +
Sbjct: 237 RNIDTVRKRKMNQIISTPPASEDEEPEVKRTK 268
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 336 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSS-ELSSNSTIEG 488
T QN+N+ L+ P PP+T + P +L SS L +ST G
Sbjct: 242 TRRSQNKNIKT--SGLSYTAPAPPSTEKSAPKESLNQLRSSFNLPDDSTTVG 291
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 419
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 78 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 137
Query: 420 NEPNAKRQRLDSSELSSNSTIE 485
E + K L+ E+SS E
Sbjct: 138 READLK-MLLELKEMSSQQKDE 158
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 419
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 87 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 146
Query: 420 NEPNAKRQRLDSSELSSNSTIE 485
E + K L+ E+SS E
Sbjct: 147 READLK-MLLELKEMSSQQKDE 167
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 419
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 78 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 137
Query: 420 NEPNAKRQRLDSSELSSNSTIE 485
E + K L+ E+SS E
Sbjct: 138 READLK-MLLELKEMSSQQKDE 158
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 419
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 87 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 146
Query: 420 NEPNAKRQRLDSSELSSNSTIE 485
E + K L+ E+SS E
Sbjct: 147 READLK-MLLELKEMSSQQKDE 167
>U80843-1|AAB37966.1| 410|Caenorhabditis elegans Hypothetical
protein C32B5.10 protein.
Length = 410
Score = 27.1 bits (57), Expect = 8.1
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 258 SLKLKAEHLIIKGFP-EKI-VKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 431
SL LK HL I G +KI + LLE S+ Q+ L++ N + T P PN
Sbjct: 234 SLNLKVTHLEILGSGVDKIAISFQPLLEGSSLQSIKLNNDFNIENPILQTSPLLIFKNPN 293
Query: 432 AKRQRLDSSELSSNSTIEGTRVY 500
R S+ + +E + ++
Sbjct: 294 ENLFRARSAFTNVRVELEKSTIF 316
>U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical
protein C06E2.5 protein.
Length = 137
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 396 PTPPATSNNEPNAKRQRLDSSELSSNSTIE-GTRVYVLPN 512
P+ + EP AKR R D+ E + +T E R + +PN
Sbjct: 81 PSNAVGATEEPAAKRARTDTPEPNKENTTEVPRRTFKIPN 120
>U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kinase
protein 1, isoforma protein.
Length = 432
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 321 NELLETSNFQNRNLSDVHQDLN-IPIP-TPPATSNNEPNAKR 440
N+L S+ ++R S +D +P P +PPATSNN N+ +
Sbjct: 358 NKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNLNSTK 399
>U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kinase
protein 1, isoformb protein.
Length = 512
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 321 NELLETSNFQNRNLSDVHQDLN-IPIP-TPPATSNNEPNAKR 440
N+L S+ ++R S +D +P P +PPATSNN N+ +
Sbjct: 438 NKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNLNSTK 479
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 336 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSS-ELSSNSTIEG 488
T QN+N+ L+ P PP+T + P +L SS L +ST G
Sbjct: 242 TRRSQNKNIKT--SGLSYTAPAPPSTEKSAPKESLNQLRSSFNLPDDSTTVG 291
>AB016838-1|BAA77824.4| 432|Caenorhabditis elegans
Ca2+/calmodulin-dependent proteinkinase kinase protein.
Length = 432
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 321 NELLETSNFQNRNLSDVHQDLN-IPIP-TPPATSNNEPNAKR 440
N+L S+ ++R S +D +P P +PPATSNN N+ +
Sbjct: 358 NKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNLNSTK 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,740
Number of Sequences: 27780
Number of extensions: 239696
Number of successful extensions: 733
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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