Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323D04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1006 + 29635372-29635442,29635544-29635589,29635672-296358... 32 0.24
02_05_0879 - 32444967-32445250,32445643-32445674,32445752-324458... 32 0.32
06_01_0745 + 5570821-5571496,5572205-5572322,5572410-5572571,557... 31 0.56
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 31 0.56
05_03_0458 + 14280953-14281866,14281964-14282912 31 0.74
04_04_1448 + 33679110-33679140,33679858-33680057,33680163-336802... 31 0.74
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 30 1.3
12_01_0910 + 8858443-8859414 29 1.7
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 29 1.7
07_03_1432 - 26508135-26508881,26509301-26509708 29 1.7
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 29 1.7
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 29 1.7
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 29 1.7
09_06_0184 - 21413275-21414267 29 2.3
08_01_1010 - 10215625-10216335,10216372-10216473 29 3.0
03_05_0922 - 28835983-28836129,28836328-28836474,28836782-288369... 29 3.0
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 28 4.0
10_08_0233 - 16061182-16061714,16062765-16063578 27 6.9
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 27 6.9
03_06_0416 - 33780911-33781861 27 6.9
03_05_1053 - 29987908-29987985,29988096-29988152,29988229-299883... 27 6.9
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 27 6.9
12_02_0017 - 12357029-12357070,12357434-12357503,12357722-123578... 27 9.1
05_06_0098 + 25560158-25560925 27 9.1
05_03_0156 - 9007543-9007628,9007923-9009189 27 9.1
04_04_0704 + 27401683-27401818,27402761-27402937,27402983-274030... 27 9.1
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 27 9.1
03_05_1046 - 29923870-29924128,29924727-29924785 27 9.1
02_03_0142 - 15676923-15677159 27 9.1
>03_05_1006 +
29635372-29635442,29635544-29635589,29635672-29635813,
29635878-29636653,29636750-29637370
Length = 551
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 85 RAGKVSAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTK 228
R GKV A+ PG P RK P P P ATP + P+ +
Sbjct: 476 RVGKVGISFE-VAKDAPGWPPVRKTSVPAPPAEAAPAVATPAAPPAAE 522
>02_05_0879 -
32444967-32445250,32445643-32445674,32445752-32445809,
32445840-32445913,32446004-32446088,32447054-32447735
Length = 404
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 322 LILRLAAILMTSSNCLKGACGSGSAKMYL*PSLLKGCSVG*PCEGS 185
LI+ +T+ NC++ +CG G+ +Y P+ L G C S
Sbjct: 231 LIVANGTYALTAGNCVQCSCGPGNLNLYCTPASLTGSCPSMQCSNS 276
>06_01_0745 +
5570821-5571496,5572205-5572322,5572410-5572571,
5572650-5572681,5573406-5573584,5573697-5573897
Length = 455
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 322 LILRLAAILMTSSNCLKGACGSGSAKMYL*P-SLLKGCS 209
L++ +T+ NC++ +CG G K+Y P SL CS
Sbjct: 240 LLVANGTYALTAGNCVQCSCGPGDLKLYCTPASLTASCS 278
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.1 bits (67), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 118 AARPRPGLPSARKAVTPM-SPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTS 294
AA P P PS A +P +P PR +PP +P+ T D + N+ R PS + +S
Sbjct: 120 AAAPPPTAPSPYSAPSPTPTPTHTQPR-PSPPLLPTPATAADPANPNKAR-HPSSNKSSS 177
Query: 295 SRWP 306
P
Sbjct: 178 PAAP 181
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 133 PGLPSARKAVTPMSPL*NCPRTA-TPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPP 309
P SA + P SP +C A +PPS ST T + T + T S S + S PP
Sbjct: 8 PATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPP 67
Query: 310 I 312
+
Sbjct: 68 L 68
>04_04_1448 +
33679110-33679140,33679858-33680057,33680163-33680272,
33680372-33680591,33680672-33680794,33680892-33680960,
33681915-33682157,33682235-33682297,33682414-33682477,
33682740-33682810
Length = 397
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 100 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSD 279
SAGL+S A P P +PS+ K RT TP ++PS + + + TR P D
Sbjct: 155 SAGLQSPAMPSPSVPSSTKWGPFSGTKGKKTRTNTPLAVPSADPTSLINRKIYTRW-PDD 213
Query: 280 SS 285
++
Sbjct: 214 NN 215
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 69 LAGNVKGRQGKRRPAVGSAAETGAPIGKKGRN-ADVTALKLPSHGYPTEHPFNKDG 233
+ N G G PA G G+P+GK + + L +P H YP++H + G
Sbjct: 571 IPSNSTGMHGSGSPASGGIH--GSPLGKTPSSYSKRRGLPMPPHEYPSQHGQGRHG 624
>12_01_0910 + 8858443-8859414
Length = 323
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 163 LRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTAII-SSRC 41
L P LP+ P++AAL GL L +PF A A++ SS C
Sbjct: 158 LLPLLPLPFPLTAALAVLGLLL-LVPFWSLAGAAAVVESSAC 198
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 159 RNADVTALKLPSHGYPTEHPFNKDGYRYILAEPD 260
+N LKL S G+ E+ ++ GYRY+L +PD
Sbjct: 382 QNIVTLELKL-SRGWGGENAYHVGGYRYLLVDPD 414
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +1
Query: 115 SAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTS 294
+A+ P P + +++P +P P ++TPPS+ T++ + T PS + +
Sbjct: 25 NASPPTPITYPSPPSLSPSTPPTYPPPSSTPPSLAPVSPSPPTTYLPPSPTPPSPAPASP 84
Query: 295 SRWPPIAISTCGAYKCEC 348
S PP G Y C
Sbjct: 85 S--PPSLGLRVGYYSSSC 100
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 112 RSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTS 246
R AA P P P AV P P+ P +TPP+ P T+ S
Sbjct: 50 RHAATPPPPPPPPTPAVEPTLPI---PPASTPPTPPQPSASTEPS 91
>06_03_0468 -
21083754-21083869,21083986-21084069,21085633-21085920,
21087525-21087687
Length = 216
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 366 DESNEWSGKPIPGWLYRP 419
D S +GKPIPGW+ RP
Sbjct: 130 DLSTRLTGKPIPGWVNRP 147
>04_03_0826 + 20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 239 SVTVFVEGMLGGVAVRGQFQSGDIGVTAFLADGSPGLGRAADRRPALTLP 90
+VT VE ++ + GQF+ GD + A G P L R D+ L+ P
Sbjct: 928 AVTQLVEDVISEAILSGQFKPGDTIMVDTDATGKPCLSRLNDQTVQLSDP 977
>09_06_0184 - 21413275-21414267
Length = 330
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 127 PRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
P P LP++ ++ P + P ++TPPS P V S R+ T P+D+
Sbjct: 80 PAPALPTSMESTFPSPRPPSTPSSSTPPSSP----VPPPSARSPTVPAPADA 127
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Frame = +1
Query: 133 PGLPSARKAVTPMSPL*NCPRTATPPSIPST----------KTVTDTSWRNQTRTRPSDS 282
P P R A +PL PR A+P PST ++ T WR + R P
Sbjct: 181 PSTPPPRAASPDYTPLSPPPRAASPEYSPSTPPPSPVPSDAESGTSPLWRRRRRHHPYQR 240
Query: 283 SMTSSRWPPIAISTCGAY 336
+S P A+ G +
Sbjct: 241 RGSSIACSPRAVQVAGGH 258
>03_05_0922 -
28835983-28836129,28836328-28836474,28836782-28836910,
28837201-28837278,28841639-28841812
Length = 224
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 381 WSGKPIPGWLYR 416
W GKPIP WLY+
Sbjct: 110 WDGKPIPYWLYK 121
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 88 AGKVSAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATP 207
+G+ A R+AA P+P P+A A M+P + A+P
Sbjct: 61 SGQRDAAARAAAAPKPARPAAGAAKNFMAPTISAASKASP 100
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 190 PRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPP 309
P + TPP+ P TS +T +R + +S R PP
Sbjct: 138 PHSRTPPASPLAAARGPTSHAGETGSRREGARSSSGRCPP 177
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 124 RPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSW 249
RP P L + P+ PL P + PP PST +T T +
Sbjct: 129 RPLPLLKQPSPDLRPLPPL-KRPESQPPPPPPSTPPLTTTGY 169
>03_06_0416 - 33780911-33781861
Length = 316
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 233 TVFVEGMLGGVAVRGQFQSGDIGVTAFLADGSPGLG 126
T +V G G AVR + GD+ V L+ S G G
Sbjct: 217 TAYVNGRRVGYAVRREASEGDLAVMQLLSTVSVGAG 252
>03_05_1053 -
29987908-29987985,29988096-29988152,29988229-29988344,
29988900-29989038,29989430-29989558,29990218-29990325,
29990418-29990645
Length = 284
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -2
Query: 379 SLLSSNSWTPRTHTYKPRTLILRLAA--ILMTSSNCLKGACGSGSAK 245
S L+S+ + P T PR L LRL A + + SS GA + SA+
Sbjct: 5 SALASSPFLPPLSTPNPRALSLRLPARRLPVASSAAPSGAAAAASAR 51
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 187 CPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRW 303
C T T P + S+ + T T S SSMTS RW
Sbjct: 416 CFSTQTRPLVASSNYGSSTRRTRSTPPTSSASSMTSPRW 454
>12_02_0017 -
12357029-12357070,12357434-12357503,12357722-12357852,
12358836-12358882,12359762-12360044,12360547-12362413,
12362454-12362665
Length = 883
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 127 PRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRN 255
P P L S A TP +P + +++PPS PS+ + S R+
Sbjct: 65 PFPNL-SGEPAPTPRAPSRHATPSSSPPSTPSSASAPPPSGRH 106
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 88 AGKVSAGLRSAARPRPGLPSAR-KAVTPMSPL*NCPRTATPPSIPSTKTVTDT-SWRNQT 261
A ++ S+ RP P PS+ + P SP PRT P+T DT S++
Sbjct: 20 AAAAASSSPSSHRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVV 79
Query: 262 RTRPSDSSMTSSRWPP 309
+ + S+ PP
Sbjct: 80 QMLTGSDTTPPSQRPP 95
>05_03_0156 - 9007543-9007628,9007923-9009189
Length = 450
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 334 KPRTLILRLAAILMTSSNCLKGACGSGSAKMYL*PSLLKGCSVG*PCEGSFRAVTSALRP 155
K T R+ I +S+C+ G + + + GCS+ EGS A+T+ L+P
Sbjct: 348 KDYTSTPRIGVIDPLNSSCICVLIGKHVLAVDMDMGKVLGCSLTDESEGSPWAITTCLKP 407
Query: 154 FLPMGAPVSAALPTAG 107
+ S+ +P AG
Sbjct: 408 CVLPPWLGSSQIPNAG 423
>04_04_0704 +
27401683-27401818,27402761-27402937,27402983-27403048,
27403139-27403219,27404089-27404207
Length = 192
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 366 DESNEWSGKPIPGWLYR 416
D S +GKPIPGW+ R
Sbjct: 106 DVSKNLTGKPIPGWVNR 122
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +1
Query: 100 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSD 279
+A L + P P PS R +P PL + PR TPP PS + T Q S
Sbjct: 565 AAALAPPSPPEP--PSPRHPPSP-PPLRSPPRQPTPPPSPSQQPPLPTPQPVQA----SP 617
Query: 280 SSMTSSRWPP 309
+S T PP
Sbjct: 618 TSPTKQHAPP 627
>03_05_1046 - 29923870-29924128,29924727-29924785
Length = 105
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 221 EGMLGGVAVRGQFQSGDIGVTAFLADGSPGL 129
EG + G ++ G+ + G G+T + DGS G+
Sbjct: 26 EGGIEGGSITGEIEGGGNGMTGGIEDGSGGV 56
>02_03_0142 - 15676923-15677159
Length = 78
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -3
Query: 210 RWGSRARAVSER*HRRYGLSCRWEPRS----RPRCRPQACAYLAC 88
R G+R RA R +R G P + R RCR Q C AC
Sbjct: 29 RLGARRRAAGRRMGKRRGEEGTGTPGAGAAGRRRCRAQGCGLWAC 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,740,280
Number of Sequences: 37544
Number of extensions: 307934
Number of successful extensions: 1428
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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