Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323D04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 39 0.002
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 39 0.002
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 39 0.002
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 31 0.38
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 30 0.87
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 30 0.87
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 30 0.87
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 30 1.2
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 30 1.2
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 30 1.2
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 29 1.5
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 29 1.5
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.5
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 1.5
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.7
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 29 2.7
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 29 2.7
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 29 2.7
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 28 3.5
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 28 3.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 3.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 3.5
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 28 3.5
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 3.5
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 28 3.5
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 28 4.7
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 28 4.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 6.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 6.2
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 27 6.2
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 27 6.2
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical... 27 6.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.2
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 27 8.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical ... 27 8.1
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 27 8.1
AC024845-2|AAF60851.1| 324|Caenorhabditis elegans Hypothetical ... 27 8.1
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 93 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 266
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 267 AP 272
P
Sbjct: 272 VP 273
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 93 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 266
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 215 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 273
Query: 267 AP 272
P
Sbjct: 274 VP 275
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 93 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 266
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 267 AP 272
P
Sbjct: 272 VP 273
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 31.9 bits (69), Expect = 0.29
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 100 SAGLRSAARPRPGLP--SARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRP 273
SA AAR RP +P SA +A+T +P T T + P+T+T + P
Sbjct: 303 SASTTGAARTRPAVPAVSAPRALTSRAPAGPARPTTTRSATPATRTAVPPRATAPPKAAP 362
Query: 274 SDSSMTSSRWP 306
+ + T + P
Sbjct: 363 ASKAPTRAPIP 373
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 142 PSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSR 300
P++ V PMS P TA SIPS + T + +++ + PS +S + R
Sbjct: 434 PTSISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPALR 486
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 100 SAGLRSAARPRPGLP--SARKAVTPMSPL*NCPRTATPPSIPSTKT 231
SA AAR RP +P SA +A+T +P T T + P+T+T
Sbjct: 325 SASTTGAARTRPAIPAVSAPRALTSRAPTGPACPTTTRSAAPATRT 370
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 30.3 bits (65), Expect = 0.87
Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +1
Query: 115 SAARPRPGLPSARKAVTPMSPL*NCP----RTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
SA P P L R PMSPL P R + PS V + S RPS S
Sbjct: 1324 SAGGPPPKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTS 1383
Query: 283 SMTSSRWPPIAISTCGAYK 339
S SS P + ST A K
Sbjct: 1384 SDVSSS-PSTSGSTSSATK 1401
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 30.3 bits (65), Expect = 0.87
Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +1
Query: 115 SAARPRPGLPSARKAVTPMSPL*NCP----RTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
SA P P L R PMSPL P R + PS V + S RPS S
Sbjct: 1324 SAGGPPPKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTS 1383
Query: 283 SMTSSRWPPIAISTCGAYK 339
S SS P + ST A K
Sbjct: 1384 SDVSSS-PSTSGSTSSATK 1401
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 136 GLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPPIA 315
G P + + SP N PR + ++P++ D+ N+ TRP ++ P ++
Sbjct: 40 GAPPTSELSSASSPSINVPRFSLSNALPNSARTVDSGISNEDETRPPTTASLPMDQPSLS 99
Query: 316 IS 321
S
Sbjct: 100 SS 101
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 239 SVTVFVEGMLGGVAVRGQFQSGDIGVTAFLADGSPGLGRAADRRPA--LTLPALHVA 75
S VF+ G + V G F S D V ++L DGS AD PA +P L VA
Sbjct: 923 SNVVFINGNIDPYHVLGLFNSPDSSVVSYLIDGS---SHCADMFPARDSDVPGLKVA 976
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 136 GLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPPIA 315
G P + + SP N PR + ++P++ D+ N+ TRP ++ P ++
Sbjct: 40 GAPPTSELSSASSPSINVPRFSLSNALPNSARTVDSGISNEDETRPPTTASLPMDQPSLS 99
Query: 316 IS 321
S
Sbjct: 100 SS 101
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 184 NCPRTATPPSIPSTKTVTDTSWRNQTRTRP 273
+ P T+TPP T T+ S+RN TRP
Sbjct: 296 SAPSTSTPPVTTITATINAGSFRNNYYTRP 325
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 184 NCPRTATPPSIPSTKTVTDTSWRNQTRTRP 273
+ P T+TPP T T+ S+RN TRP
Sbjct: 296 SAPSTSTPPVTTITATINAGSFRNNYYTRP 325
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 90 RQGKRRPAVGSAAETGAPIGKKGR 161
++G+ RPA +A+ G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 75 GNVKGRQGKRRPAVGSAAETGAPIGKKGR 161
G+ ++G+ RP +A+ G+P+ KKGR
Sbjct: 115 GSSPVKKGRGRPIKNPSADAGSPLVKKGR 143
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 90 RQGKRRPAVGSAAETGAPIGKKGR 161
++G+ RPA +A+ G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 75 GNVKGRQGKRRPAVGSAAETGAPIGKKGR 161
G+ ++G+ RP +A+ G+P+ KKGR
Sbjct: 115 GSSPVKKGRGRPIKNPSADAGSPLVKKGR 143
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 127 PRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWP 306
P P L PM+ L AT P PS + ++ S + + PS+++ TSS P
Sbjct: 90 PPPPLNYTPAGTDPMALLLPGIAAATSPKFPSLRFLSQLSSVAEKVSTPSEAADTSSSSP 149
Query: 307 PIAIST 324
+ ++T
Sbjct: 150 SLNLNT 155
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 181 RAVTSALRPFLPMGAPVSAALPT---AGLRLPCLPFTLPASGTAIISSR 44
R+ T+ F P G PV+ A PT G+ + P LP S A+ S+R
Sbjct: 298 RSSTTTPHRFNPYGKPVAPAPPTMQQMGMNMAMNPLVLPFSLQAMYSNR 346
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 129 RPRCRPQACAYLACPSRCR 73
RP+ + C L CPSRCR
Sbjct: 220 RPKVEARPCPMLICPSRCR 238
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 381 WSGKPIPGWLYR 416
W GKPIP WLY+
Sbjct: 386 WDGKPIPYWLYK 397
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 193 RTATPPSIPSTKTVTDTSWRNQTRTRPSDSS 285
R A+PP IPS K+ DT+ + TR D++
Sbjct: 341 REASPPVIPSLKSDDDTTHFEEIETRDRDNA 371
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 193 RTATPPSIPSTKTVTDTSWRNQTRTRPSDSS 285
R A+PP IPS K+ DT+ + TR D++
Sbjct: 341 REASPPVIPSLKSDDDTTHFEEIETRDRDNA 371
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 181 RAVTSALRPFLPMGAPVSAALPT---AGLRLPCLPFTLPASGTAIISSR 44
R+ T+ F P G PV+ A PT G+ + P LP S A+ S+R
Sbjct: 298 RSSTTTPHRFNPYGKPVAPAPPTMQQMGMNMAMNPLVLPFSLQAMYSNR 346
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 RTRPSDSSMTSSRWPPIAI 318
+TRPS+ S T WPP ++
Sbjct: 122 KTRPSEGSQTEKLWPPTSV 140
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 RTRPSDSSMTSSRWPPIAI 318
+TRPS+ S T WPP ++
Sbjct: 122 KTRPSEGSQTEKLWPPTSV 140
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +1
Query: 145 SARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPPIAIST 324
S TP +P T + P+T T T T+ T T ++++ T + P +T
Sbjct: 71 STTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTT 130
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 190 PRTATPPSIPSTKTVTDT-SWRNQTRTRPSDSSMTSSRWP 306
P T T P+ +++T T T + QT T+P+ ++ T + P
Sbjct: 241 PTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTP 280
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 RTRPSDSSMTSSRWPPIAI 318
+TRPS+ S T WPP ++
Sbjct: 122 KTRPSEGSQTEKLWPPTSV 140
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 RTRPSDSSMTSSRWPPIAI 318
+TRPS+ S T WPP ++
Sbjct: 122 KTRPSEGSQTEKLWPPTSV 140
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 187 CPRTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
C R S P+T T+T TS R T T P+ S
Sbjct: 1371 CGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 187 CPRTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
C R S P+T T+T TS R T T P+ S
Sbjct: 1371 CGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 187 CPRTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
C R S P+T T+T TS R T T P+ S
Sbjct: 1371 CGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 187 CPRTATPPSIPSTKTVTDTSWRNQTRTRPSDS 282
C R S P+T T+T TS R T T P+ S
Sbjct: 1371 CGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 RTRPSDSSMTSSRWPPIAI 318
+TRPS+ S T WPP ++
Sbjct: 122 KTRPSEGSQTEKLWPPTSV 140
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 28.3 bits (60), Expect = 3.5
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 100 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSI--PSTKTVTDTSWRNQTRTRP 273
+AG+ SA +P+P LP P+S + + +A SI PST + TS +
Sbjct: 187 AAGVNSALQPKP-LP-------PLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPST 238
Query: 274 SDSSMTSSRWPPIAIST 324
S SSM + PP A S+
Sbjct: 239 SSSSMAPRKTPPNASSS 255
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 205 G*PCEGSFRAVTSALRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTA 59
G P G + A P +PM P+S+ALP +P T+ SG A
Sbjct: 728 GTPSLGRELSTPLATTPLIPMNFPLSSALPVIS-AIPSNASTMDLSGAA 775
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 193 EGSFRAVTSALRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTAIISSRCSN 35
+ R +A PF P PV + LP AG +P T ++G SR S+
Sbjct: 395 QAPLRLGPNATNPFRPAPLPVPSQLPIAG--IPWAELTTSSAGAGSARSRGSD 445
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = +1
Query: 127 PRPGLPSARKAVTPMSP-----L*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSS-- 285
P P P+A + P SP L + PRT +P + + D + + + T S++S
Sbjct: 25 PSPASPAATRRSLPTSPISRRSLPSTPRTVSPRRLNNLLPDVDEHFASTSTTSSSENSPR 84
Query: 286 MTSSRWPP 309
R+PP
Sbjct: 85 RVKKRYPP 92
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 100 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIP 219
S GL A P P S + + P PL P TP + P
Sbjct: 566 SHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRP 605
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 100 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIP 219
S GL A P P S + + P PL P TP + P
Sbjct: 392 SHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRP 431
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 199 ATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPPIAIST 324
ATP ST+ TS R+ +PS SS + PIAI T
Sbjct: 3 ATPVRASSTRISRRTSSRSVADDQPSTSSAVAPPPSPIAIET 44
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 199 ATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPPIAIST 324
ATP ST+ TS R+ +PS SS + PIAI T
Sbjct: 3 ATPVRASSTRISRRTSSRSVADDQPSTSSAVAPPPSPIAIET 44
>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
protein Y22D7AR.2 protein.
Length = 1140
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 423 CPGGVLLALHDRAPQLRVAEDRLAVTGDR 509
CP G L L ++PQ + E +LA+ GD+
Sbjct: 1098 CPNGAQLIL-TQSPQCEILEPKLAMKGDK 1125
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 115 SAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTD 240
S A+P P +P+ +P P + P PPS S + +
Sbjct: 575 SPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPNAIPE 616
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 199 ATPPSIPSTKTVTDTSWRNQTRTRPSDSSMTSSRWPPIAIST 324
+TP + ST T T T + T S +S TSS P A+ T
Sbjct: 531 STPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAPIRAVRT 572
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 166 PMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRT-RPSDSSMTSS 297
P +P T TPP+ P+T T T QT T P S++T S
Sbjct: 487 PTTPTPVPTTTNTPPANPTTATPTTVGTSKQTNTISPHLSTITGS 531
>AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical
protein F19B10.11 protein.
Length = 505
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 177 ALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQFDD 290
A + P+ + E +++GY ++ PDP A FR D+
Sbjct: 14 ASEFPTVSWSREEEASQNGYSFMDHYPDPEATFRCEDE 51
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 112 RSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRPSDSSMT 291
R+ +RP + RK + + PRT P P+T TV T T T P +T
Sbjct: 789 RTTSRPYQNQQNNRKRMRTSTTT-KAPRTTVP---PTTVTVRTTKTTTTTTTPPPPPPVT 844
Query: 292 SSR 300
S +
Sbjct: 845 SKK 847
>AC024845-2|AAF60851.1| 324|Caenorhabditis elegans Hypothetical
protein Y65B4BL.4 protein.
Length = 324
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 163 TPMSPL*NCPRTATPPSIPSTKTVTDTSWRNQTRTRP 273
+P SP NC + SIPST T + T+ ++ P
Sbjct: 267 SPSSPSSNCVISTATTSIPSTSTSSTTTPKHNRSVSP 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,536,090
Number of Sequences: 27780
Number of extensions: 220954
Number of successful extensions: 925
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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