Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323C11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   186   8e-48
U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U80029-13|AAB37592.2|  429|Caenorhabditis elegans Hypothetical p...    27   8.1  
U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  186 bits (453), Expect = 8e-48
 Identities = 87/151 (57%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
 Frame = +2

Query: 71  KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 250
           K++K+ G      E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 251 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 427
           +LKAF KI   LVRELEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 428 DAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 520
           DA L++LV+PAE+VG+RIRVKLDG ++ KVH
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVH 157


>U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical
           protein F07F6.4 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 135 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 245
           S+SK T      F SF  Q ++K  YT  S SSS  R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 157 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 71
           V VGFE   RLRD+GL   +LS   +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550


>U80029-13|AAB37592.2|  429|Caenorhabditis elegans Hypothetical
           protein T20D4.5 protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -2

Query: 139 FDQRLRDRGLEGIRLSTARFDDLRTHRSNVINIAITFL 26
           FD R + R +E + +     DD+  HR+  +   + +L
Sbjct: 348 FDLRNKGRNVEKVVVKMTGMDDITQHRAGTVECCLNYL 385


>U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical
           protein T19D12.7 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 358 LRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHIDD 230
           L+QD     K +MF    +F   DK  +D  + L+F+  + DD
Sbjct: 167 LQQDFRSFQKVWMFNKTEMFSADDKTFIDSNRSLEFQVLNEDD 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,915,655
Number of Sequences: 27780
Number of extensions: 211179
Number of successful extensions: 668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)