Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323C10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118934-1|AAM50794.1|  368|Drosophila melanogaster LD24355p pro...    31   1.3  
AE013599-3778|AAF47141.2|  368|Drosophila melanogaster CG3163-PA...    31   1.3  
AY061511-1|AAL29059.1|  266|Drosophila melanogaster LD46678p pro...    29   2.9  
AE014297-586|AAF54042.2|  266|Drosophila melanogaster CG10053-PA...    29   2.9  
BT021388-1|AAX33536.1|  843|Drosophila melanogaster LD32875p pro...    28   8.8  
AY075446-1|AAL68259.1|  861|Drosophila melanogaster RE06111p pro...    28   8.8  

>AY118934-1|AAM50794.1|  368|Drosophila melanogaster LD24355p
           protein.
          Length = 368

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
 Frame = -3

Query: 366 KNPIVDIINKASKVIITQHM*KIQKNKTPSK--NTITRNIVEVIKITVTEKNVDISSKFN 193
           K+P  D  +   K I+TQ+  K+  N++PS+  N ITR     +   ++E N     KF 
Sbjct: 221 KSPPGDSESPQCKRIVTQNQTKLISNQSPSQKANHITRKRSSSVSSQISEDNEPPPGKFR 280

Query: 192 NQAAI----KVIANGFLSNDSINTFDALRNFSEVLQYELCS 82
              +     ++ +    S DS    D   NF +++ ++L S
Sbjct: 281 ADISTIDFERLFSLALKSADS-QLDDHFSNFGKIIAHKLRS 320


>AE013599-3778|AAF47141.2|  368|Drosophila melanogaster CG3163-PA
           protein.
          Length = 368

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
 Frame = -3

Query: 366 KNPIVDIINKASKVIITQHM*KIQKNKTPSK--NTITRNIVEVIKITVTEKNVDISSKFN 193
           K+P  D  +   K I+TQ+  K+  N++PS+  N ITR     +   ++E N     KF 
Sbjct: 221 KSPPGDSESPQCKRIVTQNQTKLISNQSPSQKANHITRKRSSSVSSQISEDNEPPPGKFR 280

Query: 192 NQAAI----KVIANGFLSNDSINTFDALRNFSEVLQYELCS 82
              +     ++ +    S DS    D   NF +++ ++L S
Sbjct: 281 ADISTIDFERLFSLALKSADS-QLDDHFSNFGKIIAHKLRS 320


>AY061511-1|AAL29059.1|  266|Drosophila melanogaster LD46678p
           protein.
          Length = 266

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 202 TAYIYVFFCNCYFDDLNYISSNC 270
           TAY + ++C  ++DD   + SNC
Sbjct: 236 TAYCFCYWCGTHYDDAEDLGSNC 258


>AE014297-586|AAF54042.2|  266|Drosophila melanogaster CG10053-PA
           protein.
          Length = 266

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 202 TAYIYVFFCNCYFDDLNYISSNC 270
           TAY + ++C  ++DD   + SNC
Sbjct: 236 TAYCFCYWCGTHYDDAEDLGSNC 258


>BT021388-1|AAX33536.1|  843|Drosophila melanogaster LD32875p
           protein.
          Length = 843

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = -3

Query: 351 DIINKASKVIITQHM*KIQ--KNKTPSKNTITRNIVEVIKITVTEKNVDISSK-FNNQAA 181
           +I+    K++  Q    IQ  K +TP    I R  VE++K+ +   N+DI+ + ++ + A
Sbjct: 62  EIMEVVKKILQRQLNINIQNIKGETPLHIAIARRNVEMVKLLLKVPNIDINLRTYDEKCA 121

Query: 180 IKV 172
           +++
Sbjct: 122 LEL 124


>AY075446-1|AAL68259.1|  861|Drosophila melanogaster RE06111p
           protein.
          Length = 861

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = -3

Query: 351 DIINKASKVIITQHM*KIQ--KNKTPSKNTITRNIVEVIKITVTEKNVDISSK-FNNQAA 181
           +I+    K++  Q    IQ  K +TP    I R  VE++K+ +   N+DI+ + ++ + A
Sbjct: 80  EIMEVVKKILQRQLNINIQNIKGETPLHIAIARRNVEMVKLLLKVPNIDINLRTYDEKCA 139

Query: 180 IKV 172
           +++
Sbjct: 140 LEL 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,786,867
Number of Sequences: 53049
Number of extensions: 322554
Number of successful extensions: 711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)