Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323C08f
         (342 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   1.4  
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    24   1.8  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    24   1.8  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   3.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.1  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           22   5.5  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    22   7.2  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    22   7.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    21   9.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 228 QMYHEHRPREQWPG*QKPGEQRPGSR 305
           Q   + RP++Q P  Q+P +QR   R
Sbjct: 466 QQQQQQRPQQQRPQQQRPQQQRSQQR 491



 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 225 RQMYHEHRPREQWPG*QKPGEQRP 296
           RQ     + ++Q P  Q+P +QRP
Sbjct: 460 RQQQQPQQQQQQRPQQQRPQQQRP 483


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 336 HYRANWVPGPPSSPVFVR 283
           HYRAN  P  P +  FVR
Sbjct: 34  HYRANEFPDDPVTHCFVR 51


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 336 HYRANWVPGPPSSPVFVR 283
           HYRAN  P  P +  FVR
Sbjct: 47  HYRANEFPDDPVTHCFVR 64


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 204 LPGRALSRQMYHEHRPREQWPG*QKPGEQRPGSRG 308
           LP ++  RQ    HR  +QWP  Q+ G+Q+    G
Sbjct: 259 LPQQSAQRQP--AHRQHQQWPH-QQNGQQQQQRMG 290


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 59  HDYYRTKKKHNKTEITKRNRTIKHFQ 136
           HD    KK  N T   ++NR +  +Q
Sbjct: 21  HDLVEVKKIANNTVFVRKNRALLIYQ 46


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 245 VFVVHLPTKCSSW 207
           V+  H+PTK S+W
Sbjct: 342 VYFYHIPTKQSTW 354


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 154 CRQTVFLEVFNCSVSFCYFRFVV 86
           CR  V+L   +C  S C   FV+
Sbjct: 13  CRDIVWLRSCSCHSSVCAVSFVM 35


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 106 CYFRFVVFFLCPVVIVPHRHLCS 38
           C F  ++  L  VV++  RH CS
Sbjct: 2   CKFYRLISTLLVVVVIAPRHQCS 24


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 57  RIATCVQ*NHSGPR 16
           ++ T V  NHSGPR
Sbjct: 763 KVVTNVMRNHSGPR 776


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,495
Number of Sequences: 2352
Number of extensions: 5263
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)