Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323C08f
         (342 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.3  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   2.4  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   2.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   7.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   9.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   9.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    20   9.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 59  HDYYRTKKKHNKTEITKRNRTIKHFQENSL 148
           H Y   +K +NK EI   N  I+ F  + L
Sbjct: 430 HSYKMHQKPYNKDEIIYPNLKIESFTVDKL 459


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 59  HDYYRTKKKHNKTEITKRNRTIKHFQENSL 148
           H Y   +K +NK EI   N  I+ F  + L
Sbjct: 430 HSYKMHQKPYNKDEIIYPNLKIESFTVDKL 459


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 265 GHCSRGLCSWYICR 224
           GHC +G+C   ICR
Sbjct: 72  GHCEKGVC---ICR 82


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 265 GHCSRGLCSWYICR 224
           GHC +G+C   ICR
Sbjct: 47  GHCEKGVC---ICR 57


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 71   RTKKKHNKTEITKRNR 118
            RT + HN++  T RNR
Sbjct: 1123 RTAEVHNRSRETARNR 1138


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/28 (28%), Positives = 11/28 (39%)
 Frame = +2

Query: 65  YYRTKKKHNKTEITKRNRTIKHFQENSL 148
           YY     HN   +  +  T   FQ N +
Sbjct: 263 YYSAMSSHNLNYVNTKQFTQGKFQANDI 290


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 305 PRARSLFAWLLLARPLFARPVFVVHLPTK 219
           P  R ++AW      ++ + VF+ + P +
Sbjct: 653 PLDRPMWAWNFTIPNMYFKDVFIYNRPNE 681


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 305 PRARSLFAWLLLARPLFARPVFVVHLPTK 219
           P  R ++AW      ++ + VF+ + P +
Sbjct: 653 PLDRPMWAWNFTIPNMYFKDVFIYNRPNE 681


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 236 PRTQAARTMAGLTKARRTKTGLE 304
           P T    T+  LTKA+R    LE
Sbjct: 79  PETSRHTTLGLLTKAKRFIKSLE 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,884
Number of Sequences: 438
Number of extensions: 1242
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)