Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323C03f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF499232-1|AAP29638.1|  523|Homo sapiens gag protein protein.          30   5.7  
BC114430-1|AAI14431.1| 1203|Homo sapiens SPOCD1 protein protein.       29   9.9  
BC039870-1|AAH39870.1|  181|Homo sapiens SPOCD1 protein protein.       29   9.9  
AL354919-9|CAI16892.1|  696|Homo sapiens SPOC domain containing ...    29   9.9  
AK131447-1|BAD18592.1| 1216|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AK091016-1|BAC03567.1|  696|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AK058077-1|BAB71652.1|  378|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>AF499232-1|AAP29638.1|  523|Homo sapiens gag protein protein.
          Length = 523

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +3

Query: 48  HPADQRTRLWQPSPSPSVLSYPNSTISYT 134
           H  ++R  ++QP  S ++L++ N+T+SYT
Sbjct: 206 HMVEKRVFVYQPFTSANLLNWKNNTLSYT 234


>BC114430-1|AAI14431.1| 1203|Homo sapiens SPOCD1 protein protein.
          Length = 1203

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 20   PKPTSPARGAPCRPTNEALATFPFP 94
            P+P  PAR +   PT+EA +  PFP
Sbjct: 1176 PEPPGPARDSSLGPTDEAGSECPFP 1200


>BC039870-1|AAH39870.1|  181|Homo sapiens SPOCD1 protein protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 20  PKPTSPARGAPCRPTNEALATFPFP 94
           P+P  PAR +   PT+EA +  PFP
Sbjct: 154 PEPPGPARDSSLGPTDEAGSECPFP 178


>AL354919-9|CAI16892.1|  696|Homo sapiens SPOC domain containing 1
           protein.
          Length = 696

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 20  PKPTSPARGAPCRPTNEALATFPFP 94
           P+P  PAR +   PT+EA +  PFP
Sbjct: 669 PEPPGPARDSSLGPTDEAGSECPFP 693


>AK131447-1|BAD18592.1| 1216|Homo sapiens protein ( Homo sapiens cDNA
            FLJ16587 fis, clone TESTI4000214, weakly  similar to
            Human transcription factor TFIIS. ).
          Length = 1216

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 20   PKPTSPARGAPCRPTNEALATFPFP 94
            P+P  PAR +   PT+EA +  PFP
Sbjct: 1189 PEPPGPARDSSLGPTDEAGSECPFP 1213


>AK091016-1|BAC03567.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33697 fis, clone BRAWH2004068. ).
          Length = 696

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 20  PKPTSPARGAPCRPTNEALATFPFP 94
           P+P  PAR +   PT+EA +  PFP
Sbjct: 669 PEPPGPARDSSLGPTDEAGSECPFP 693


>AK058077-1|BAB71652.1|  378|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25348 fis, clone TST01415. ).
          Length = 378

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 20  PKPTSPARGAPCRPTNEALATFPFP 94
           P+P  PAR +   PT+EA +  PFP
Sbjct: 351 PEPPGPARDSSLGPTDEAGSECPFP 375


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,772,693
Number of Sequences: 237096
Number of extensions: 1646264
Number of successful extensions: 4814
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4808
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)