Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323C03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    34   0.13 
AE014134-126|AAF51481.1|  795|Drosophila melanogaster CG11835-PA...    28   8.8  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 14    RGPKPTSPARGAPCRPTNEALATFPFPFCSLLPKF 118
             R  +P +P + +PC P +E   +   P CS LP+F
Sbjct: 13998 RDERPQNPCQPSPCGPNSECRVSGDSPSCSCLPEF 14032



 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 32    SPARGAPCRPTNEALATFPFPFCSLLPKFN 121
             +P + +PC P +E  AT     CS LP+++
Sbjct: 19952 NPCQPSPCGPNSECQATSGGARCSCLPQYH 19981


>AE014134-126|AAF51481.1|  795|Drosophila melanogaster CG11835-PA
           protein.
          Length = 795

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 2   PNSARGPKPTSPARGAPCRPTN 67
           P SA  PK TSP  G P  P +
Sbjct: 768 PKSAASPKATSPKAGTPTNPAS 789


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,784,062
Number of Sequences: 53049
Number of extensions: 471333
Number of successful extensions: 1561
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)