Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323B03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006630-8|AAK68330.1|  232|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z81588-2|CAB04712.1|  379|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL021176-3|CAA15976.2|  316|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine re...    27   8.1  

>AC006630-8|AAK68330.1|  232|Caenorhabditis elegans Hypothetical
           protein F14H12.8 protein.
          Length = 232

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 97  AYCG*KRKEERNVVQCIIVFLIFHIMYFTYLS 192
           A+ G ++  +RN V  II+F +  I+ F +LS
Sbjct: 104 AFSGSQKSPQRNFVAHIIIFFVVMIILFVFLS 135


>Z81588-2|CAB04712.1|  379|Caenorhabditis elegans Hypothetical
           protein T07D10.2 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +3

Query: 102 LWLKKKRRT*CCTMYHSIFNISYYVFYLFIVTQHLPSKIQN*MFICKC 245
           L+L +KR   C   Y +      YV     V   LPS I   +++C C
Sbjct: 186 LYLFEKRNGDCSENYTTALQYQLYVCLFNSVVWLLPSAIAGWLYLCVC 233


>AL021176-3|CAA15976.2|  316|Caenorhabditis elegans Hypothetical
           protein Y43E12A.3 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 295 EKCTLNKIKQRQILFVIYNPFIPNHTSYCNQSKIIKENAAVTESLRIG 438
           E C ++    R+IL +IY P +P    +  +S ++++   +   LRIG
Sbjct: 191 ELCNISAPDFRRILNIIYPPHLP-PKQWIKESDLVEQFEHIQRILRIG 237


>Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical
           protein R04D3.8 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 143 HCTTLRSSFLFQPQYAIYL-EKITIIFKNVLPCIYVKRFLNSLIVCM 6
           +C T ++  LFQ QY IYL   + +  + ++   +V  +   L+ C+
Sbjct: 269 YCVTTKTEILFQ-QYFIYLASALPVFIEPIVTLYFVIPYRKKLLSCL 314


>U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical
           protein T08H10.1 protein.
          Length = 333

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +1

Query: 238 VSVDNACEVLKSF-FPLIREEKCTLNKIKQRQILFV----IYNPFIPN 366
           VS D   E + +F F L  E+  TLN I+ R  LF+    + +PF P+
Sbjct: 270 VSPDRIVENISTFDFKLSDEDMHTLNSIETRTRLFIADFAVKHPFFPH 317


>AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein99 protein.
          Length = 347

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 132 CCTMYHSIFNISYYVFYLFIVTQHLPS 212
           C ++ HS+F++S  ++YL+I    L S
Sbjct: 221 CHSVGHSVFHVSCTIYYLYIAPSDLIS 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,050,898
Number of Sequences: 27780
Number of extensions: 213153
Number of successful extensions: 519
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)