Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323B02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016446-4|AAC24164.1|  321|Caenorhabditis elegans Serpentine re...    33   0.16 
AL117206-1|CAB60446.1|  644|Caenorhabditis elegans Hypothetical ...    31   0.50 
AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine re...    29   1.5  
AF016446-6|AAC24162.1|  322|Caenorhabditis elegans Serpentine re...    29   2.0  
Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF067942-1|AAG45570.1|  488|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z72515-2|CAA96682.3|  329|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U97403-5|AAO21397.1|  268|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U97403-4|AAB52474.2|  445|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83111-3|CAB05536.1|  361|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U41533-1|AAA83162.2|  357|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z93380-7|CAB07603.2|  335|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z82053-11|CAB04839.2|  335|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z81111-2|CAB03266.1|  535|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z66496-6|CAA91281.3|  191|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z48585-12|CAI46589.1|  191|Caenorhabditis elegans Hypothetical p...    27   8.1  
AF016676-4|AAG24104.1|  463|Caenorhabditis elegans Cytochrome p4...    27   8.1  

>AF016446-4|AAC24164.1|  321|Caenorhabditis elegans Serpentine
           receptor, class h protein23 protein.
          Length = 321

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -3

Query: 252 FHIPLFEIYFKHIVIFATYHYYILCYVLKTLFY 154
           + + LF ++F    +F TY Y++L +V + LF+
Sbjct: 26  YFLALFSLFFIKSKVFVTYRYFLLWHVFENLFF 58


>AL117206-1|CAB60446.1|  644|Caenorhabditis elegans Hypothetical
           protein Y67A10A.1 protein.
          Length = 644

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 407 YNYSHPKLHKLLTDFGMFSGHELLINLAISAHRLYFSAHK 288
           YNYS  +   ++  +G+FS H LL   A+   +     HK
Sbjct: 450 YNYSDYRYMSVIASYGLFSDHRLLSQQALEFSKKQVELHK 489


>AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine
           receptor, class h protein22 protein.
          Length = 329

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 252 FHIPLFEIYFKHIVIFATYHYYILCYVLKTLFY 154
           + + LF +      +F TY Y++L +VL+ LF+
Sbjct: 26  YFLALFSLVSIKSKVFVTYRYFLLWHVLENLFF 58


>AF016446-6|AAC24162.1|  322|Caenorhabditis elegans Serpentine
           receptor, class h protein20 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 252 FHIPLFEIYFKHIVIFATYHYYILCYVLKTLFY 154
           + + LF + F    IFA Y ++++ +VL  LF+
Sbjct: 26  YALALFSLIFIKTKIFAIYRFFLIWHVLDNLFF 58


>Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical
           protein K08G2.7 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 393 MAVIIFVQHINYISCNQRNFNVHCRFFNKN 482
           M V IFV  ++YI CN+RN +   + F  +
Sbjct: 266 MYVSIFVIQLSYILCNKRNMSSFLKLFKSD 295


>AF067942-1|AAG45570.1|  488|Caenorhabditis elegans Hypothetical
           protein ZK6.8 protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -3

Query: 300 FCSQKFEYYANCCNLLFHIPLFEIYFKHIVIFATYHYYILCYVLKTLFYYIGDELKEIK 124
           F   KF     CC + F  PL  IY+  I I       ILC +    F++    +K+++
Sbjct: 409 FSVSKFYQAIGCCVIFFISPLLNIYYYVIGI------PILCIIASVCFFFETRRIKQME 461


>Z72515-2|CAA96682.3|  329|Caenorhabditis elegans Hypothetical
           protein T11A5.2 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 329 N*SATHGQKTFQNQSAIYVILDGCNYICSAY*LYKLQSAQF 451
           N S+    KTF N S  Y+I     YI   Y   +L+ AQ+
Sbjct: 233 NISSITALKTFANMSVTYIIFQNLCYITLMYYGIQLERAQY 273


>U97403-5|AAO21397.1|  268|Caenorhabditis elegans Hypothetical
           protein T10E9.7b protein.
          Length = 268

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 428 IINMLNKYNYSHPKLHKLLTDFGMFSGHELLINLAISAH 312
           + +M   +  +HP L ++LTD+G F GH    +  +S +
Sbjct: 167 VYDMYGVWFNNHPDLRRILTDYG-FEGHPFRKDYPLSGY 204


>U97403-4|AAB52474.2|  445|Caenorhabditis elegans Hypothetical
           protein T10E9.7a protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 428 IINMLNKYNYSHPKLHKLLTDFGMFSGHELLINLAISAH 312
           + +M   +  +HP L ++LTD+G F GH    +  +S +
Sbjct: 344 VYDMYGVWFNNHPDLRRILTDYG-FEGHPFRKDYPLSGY 381


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
 Frame = -1

Query: 464 TMYVKIALIAAYIINMLNK-YNYSHPKLHKLL-----TDFGMFSGHELLINLAISAHRLY 303
           T++V + ++  +I  +L K ++  +P +  ++     T+FG       +I    +     
Sbjct: 40  TVFVIMFILKVFIRRLLTKKHDLMNPHVFLVIVLSQVTNFGYTLADYFVIRAPSTGIMTS 99

Query: 302 FSAHKNSNIMLTVVTFFSIFHYLKYTSNTLSFLLPII 192
           + A +  N  L ++ FFSI  Y  YT+     LL ++
Sbjct: 100 WCASQKPNHFLKIIFFFSI--YFNYTAFLFPLLLSVL 134


>Z83111-3|CAB05536.1|  361|Caenorhabditis elegans Hypothetical
           protein F57G8.4 protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 278 IMLTVVTFFSIFHYLKY 228
           I+L V TFFSIF+Y +Y
Sbjct: 147 IVLGVSTFFSIFYYFRY 163


>U41533-1|AAA83162.2|  357|Caenorhabditis elegans Hypothetical
           protein R05F9.7 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = -3

Query: 309 IVFFCSQKFEYYANCCNLLFHIPLFEIYFKHIVIFATYHYYILCYVLKTLFYYIGDELKE 130
           +  FC+     Y  C   +  I  FE    +I++FA+        VL  L+YY   E K 
Sbjct: 162 VAAFCALVSLTYTQC--FVIPICFFEASLLYIILFASLWAVFSNIVLMCLYYYNVQESKR 219

Query: 129 IKMNDE 112
           +    E
Sbjct: 220 LSWKAE 225


>Z93380-7|CAB07603.2|  335|Caenorhabditis elegans Hypothetical
           protein T26E3.9 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -3

Query: 291 QKFEYYANCCNLLFHIP--LFEIYFKHIV-IFATYHYYILCY 175
           + F Y ++ C+LLFH      E+YF ++   F+TY  + L +
Sbjct: 87  RSFVYASDPCSLLFHFTECEVELYFYYLTNYFSTYSVFSLTF 128


>Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical
           protein M01B2.3 protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -3

Query: 213 VIFATYHYYILCYVLKTLFY 154
           ++FAT  +++ CY+L ++FY
Sbjct: 13  ILFATAAFFLNCYILFSIFY 32


>Z82053-11|CAB04839.2|  335|Caenorhabditis elegans Hypothetical
           protein T26E3.9 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -3

Query: 291 QKFEYYANCCNLLFHIP--LFEIYFKHIV-IFATYHYYILCY 175
           + F Y ++ C+LLFH      E+YF ++   F+TY  + L +
Sbjct: 87  RSFVYASDPCSLLFHFTECEVELYFYYLTNYFSTYSVFSLTF 128


>Z81111-2|CAB03266.1|  535|Caenorhabditis elegans Hypothetical
           protein T01G5.2 protein.
          Length = 535

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 321 FCSQIVFFCSQKFEYYANCCNLLFHIPLF 235
           +   I+FFC      Y+NC N+L + P F
Sbjct: 3   YLQSIIFFC---LLLYSNCLNILVYAPAF 28


>Z66496-6|CAA91281.3|  191|Caenorhabditis elegans Hypothetical
           protein E04D5.4 protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 321 FCSQIVFFCSQKFEYYANCCN 259
           FCS I + C+ K E+ A  CN
Sbjct: 165 FCSSIYYDCATKKEFCAKTCN 185


>Z48585-12|CAI46589.1|  191|Caenorhabditis elegans Hypothetical
           protein E04D5.4 protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 321 FCSQIVFFCSQKFEYYANCCN 259
           FCS I + C+ K E+ A  CN
Sbjct: 165 FCSSIYYDCATKKEFCAKTCN 185


>AF016676-4|AAG24104.1|  463|Caenorhabditis elegans Cytochrome p450
           family protein 33C6 protein.
          Length = 463

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 425 INMLNKYNYSHPK-LHKLLTDFGMFSGHELLINLAISAHRLYFSAHKNSNIMLTVVTFFS 249
           +N    Y  +HP+ L K+  +F    G + L+++    +  YF+A  N +     +   +
Sbjct: 310 VNWTICYVLNHPEVLQKMNEEFDQVVGSDRLVSMGDKNNLPYFNAVLNESQRCANIVTIN 369

Query: 248 IFH 240
           +FH
Sbjct: 370 LFH 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,256,910
Number of Sequences: 27780
Number of extensions: 222576
Number of successful extensions: 719
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)