Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323B02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    24   1.1  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   3.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.8  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 113 NNSHYFYMHNKTSKSRFYKS 54
           NN++Y Y +N  +K  +YK+
Sbjct: 325 NNNNYKYNYNNYNKKLYYKN 344


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -3

Query: 309 IVFFCSQKFEYYANCCNLLFHIPLFEIYFKHIVIFATYHYYILCYVLKT---LFYYIGDE 139
           +V F +++   Y +CC   +    +EI  +   +F  ++  + C ++ +   L +Y+  E
Sbjct: 181 LVNFSARRNVEYYSCCPEPYPDITYEIRLRRRPMFYVFNLILPCILINSVALLVFYVPSE 240

Query: 138 LKE 130
             E
Sbjct: 241 SGE 243


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 443 LIAAYIINMLNKYNYSHPKLHKLLTDFGMFSGHELLINLAISAHRLYF 300
           L+  +  +ML+  + +  K  K+     +FSGHE  I   + A +LY+
Sbjct: 229 LLRIFTKHMLDVVSGTQKKKRKIY----LFSGHESNIASVLHALQLYY 272


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 443 LIAAYIINMLNKYNYSHPKLHKLLTDFGMFSGHELLINLAISAHRLYF 300
           L+  +  +ML+  + +  K  K+     +FSGHE  I   + A +LY+
Sbjct: 244 LLRIFTKHMLDVVSGTQKKKRKIY----LFSGHESNIASVLHALQLYY 287


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 431 YIINMLNKYNYSHPKLHKLL 372
           Y  N  NKYNY++   +K L
Sbjct: 96  YKYNYNNKYNYNNNNYNKKL 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,817
Number of Sequences: 438
Number of extensions: 2749
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)