Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323A08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    29   1.7  
05_01_0486 - 4047055-4049013                                           29   3.0  

>09_02_0048 -
           3532663-3533475,3534086-3534589,3534715-3535740,
           3536083-3536226,3536974-3537375,3537499-3537721,
           3537830-3542368,3542480-3542599,3543005-3543038,
           3543922-3544102,3544198-3544815,3545022-3551098,
           3551139-3551304,3551508-3551614,3552056-3552178,
           3553417-3553642
          Length = 5100

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = -2

Query: 499 KFFVILEPTLLKQSNNGTVKRSLDLKNLCILKCCELYIET*M*DSISFHNITXXXXXX*L 320
           K FV     LL+++N+ +   SLDL N C +  C  ++E  +   ++FH+ T       L
Sbjct: 720 KVFVQYVGYLLEKANDKS-SSSLDLNNFCRILPCAFHLEILL---VAFHS-TTGPEKADL 774

Query: 319 LHIIMFSL 296
           ++I++ SL
Sbjct: 775 INIVLSSL 782


>05_01_0486 - 4047055-4049013
          Length = 652

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -1

Query: 416 MYIEMLRIIYRNLNVRFYFIS*YNFLTVFFLIIAYYYVFIKRATYMHL 273
           ++IE+  I+      RFY++  + F+ +F L+I    V +   TYMHL
Sbjct: 523 LFIELFFILSSIWLGRFYYVFGFLFIVLFLLVIVCGEVSLV-LTYMHL 569


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,100,212
Number of Sequences: 37544
Number of extensions: 129061
Number of successful extensions: 160
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)