Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323A08f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    32   1.1  
AY623010-1|AAV41518.1|   94|Homo sapiens differentially placenta...    29   7.5  
AY302185-1|AAP68818.1|   94|Homo sapiens replicative senescence ...    29   7.5  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 416 MYIEMLRIIYRNLNVRFY-FIS*YNFLTVFFLIIAYYYVFIKRATYMHLKQXYIVALLIV 240
           +YI      Y  L +  Y +I  Y +L ++  I  Y Y+++    Y+H+   YI   L +
Sbjct: 35  LYIYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIYLHIFIYLHI-FIYICICLYI 93

Query: 239 FXY 231
           F Y
Sbjct: 94  FIY 96


>AY623010-1|AAV41518.1|   94|Homo sapiens differentially placenta 1
           expressed protein protein.
          Length = 94

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -1

Query: 401 LRIIYRNLNVRFYFIS*YNFLTVFFLI---IAYYYVFIKRATYMHLKQXYIVALLIVF 237
           L  IY+N+N + Y +   +FL   + I   I ++Y  +   TY  +   +I+   I F
Sbjct: 10  LLAIYKNVNSKLYLLRMSSFLIYIYTIVHLIYFFYTVLNTQTYFAVHDIFILFSWICF 67


>AY302185-1|AAP68818.1|   94|Homo sapiens replicative senescence
           upregulated protein protein.
          Length = 94

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -1

Query: 401 LRIIYRNLNVRFYFIS*YNFLTVFFLI---IAYYYVFIKRATYMHLKQXYIVALLIVF 237
           L  IY+N+N + Y +   +FL   + I   I ++Y  +   TY  +   +I+   I F
Sbjct: 10  LLAIYKNVNSKLYLLRMSSFLIYIYTIVHLIYFFYTVLNTQTYFAVHDIFILFSWICF 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,188,366
Number of Sequences: 237096
Number of extensions: 901571
Number of successful extensions: 832
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)