Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323A04f
(405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 144 3e-35
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 0.46
02_05_0237 + 27095817-27097433 30 0.80
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 29 1.1
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 29 1.4
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 29 1.4
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 29 1.8
08_02_0478 + 17621678-17623768 28 2.4
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 28 3.2
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 3.2
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 28 3.2
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 3.2
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 4.3
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 27 5.6
05_07_0009 - 27015346-27015705,27016552-27016676,27016778-270168... 27 5.6
05_03_0039 - 7621613-7622695 27 5.6
04_03_0350 + 14755619-14755692,14755697-14755883,14755964-147560... 27 5.6
04_01_0360 - 4720997-4721812 27 5.6
08_01_0547 - 4772768-4773154 27 7.5
05_03_0033 - 7585267-7586028 27 7.5
10_02_0141 + 5761931-5762020,5762170-5762201,5762453-5762604,576... 26 9.9
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 26 9.9
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 26 9.9
03_02_0733 - 10801380-10802009 26 9.9
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263... 26 9.9
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 144 bits (348), Expect = 3e-35
Identities = 69/104 (66%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RF+MESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLG
Sbjct: 126 RFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLG 185
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP-TSEV 311
IKVKIML WD +GK GP P PD + + PKDE +P T+E+
Sbjct: 186 IKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEI 229
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 30.7 bits (66), Expect = 0.46
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 221 QERPEEATTRPHPGDRAQGRARAPR 295
Q R + +T RP PG R++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>02_05_0237 + 27095817-27097433
Length = 538
Score = 29.9 bits (64), Expect = 0.80
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 283 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPS 176
G+ L +V R GCG+FG + W G + L+PS
Sbjct: 152 GAHLPAVIRALVGCGWFG--IESWIGGRAVFLLLPS 185
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 158 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARA 289
A + S R G++ + P R+E + T RP PG + A A
Sbjct: 455 AERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGERSAAA 498
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 158 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAP 292
A + R+TRN G A + RP + T + + G A AP
Sbjct: 1161 AEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAP 1205
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 126 NDYVNTATRHVLLR----QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 275
++ +N H+ +R QGVL +++ + +Q +NGP+K + L+TE K
Sbjct: 359 SERINGIVNHLRIRGNPVQGVLQLEILRQIALPKQSQNGPRKSRLTISLMTEHK 412
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 168 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 311
Q VL I+ K ++ + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>08_02_0478 + 17621678-17623768
Length = 696
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 84 KFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 179
K + GL+IHSG ND+V+++ + + G++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGII 452
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 356 DSGDRLRQRRGREGAHFAGRLEGHGLVLG 270
+ GD+ + +G EG +G GHG V+G
Sbjct: 164 EEGDKGMKVKGEEGCRASGSDSGHGCVIG 192
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 268 SVTRMWSGCGFFGPFLPCWSH 206
S T M S CGF G CW+H
Sbjct: 211 SSTGMQSNCGFEGQVNACWTH 231
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 149 QTCASQARSTRNQGQNHVAVGPARQERPEEATTR-PHPGDRAQGRARAPRADQ 304
Q C + +HV P ++ RP + +R P R R RA R +Q
Sbjct: 861 QPCNDKLEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQ 913
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 231 PKKPQPDHILVTEPKDEPVPLEPTS 305
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 117 LQSGS*VHLQTSLIWHVDHAACQIQQLHNHGH 22
+QSG+ LIWH+ + C+I+ H H
Sbjct: 753 IQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 129 DYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
+YV A V + VL I+ K +++ + P P+P+ EP+ EPV E E
Sbjct: 287 EYVTEAPT-VAQKDKVLAIEYKKEAEEEEKPASPPPAPEPEPEQEPEPEPEPVKEEAPKE 345
>05_07_0009 -
27015346-27015705,27016552-27016676,27016778-27016853,
27016923-27017105,27018000-27018077,27018159-27018239,
27018347-27018412,27018491-27018556,27019126-27019176,
27019286-27019378,27019498-27019625,27019713-27019851,
27021039-27021136,27021332-27021401,27021565-27021654
Length = 567
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 129 DYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
+YV A R V +R+ L + +++L + + + P P P +EPVP+ P +E
Sbjct: 305 EYVREAPRMVPVREP-LELPERLLLTYKPEEQEEDSVPDPVEE-EKPPVEEPVPVPPVTE 362
Query: 309 VRS 317
S
Sbjct: 363 AVS 365
>05_03_0039 - 7621613-7622695
Length = 360
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 204 PWDQQGKNGPK-KPQPDHILVTEPKDEPVPLEP 299
P + + K PK KP P H EPK EP P EP
Sbjct: 53 PPELEPKPKPKPKPHPKHESKPEPKPEPKP-EP 84
>04_03_0350 +
14755619-14755692,14755697-14755883,14755964-14756072,
14756157-14756379,14756716-14756794,14757222-14757273,
14757354-14757416,14757519-14757616,14757970-14758031,
14758066-14758159,14758430-14758509,14758617-14758686,
14758807-14758864,14758973-14759037,14759127-14759221,
14759318-14759402
Length = 497
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 244 CGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVAVLT*SLQGSPEW 107
C F P P H ++ L+PS C T +A L G P++
Sbjct: 314 CYRFSPEFPVIIHNELMFLLLPSCSCFDYTNGLADLVVGYMGVPKY 359
>04_01_0360 - 4720997-4721812
Length = 271
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 356 DSGDRLRQRRGREGAHFAGRLEGHGL 279
D G R RQR G G A R +G GL
Sbjct: 168 DGGRRRRQRDGEAGVEAAARGDGDGL 193
>08_01_0547 - 4772768-4773154
Length = 128
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 395 FNFFLLIYSYILSDS-GDRLRQRRGREGAHFAGRLEGHGLVLGL 267
+ F + ++S+ S G ++ G A FA GHGLVL L
Sbjct: 8 YRFLVNLFSFFAMGSLGGKIIATAGCAIAFFAAGASGHGLVLSL 51
>05_03_0033 - 7585267-7586028
Length = 253
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 216 QGKNGPK-KPQPDHILVTEPKDEPVPLEPTSE 308
+ K+ PK +P+P L EPK EP EP SE
Sbjct: 128 EAKSEPKSEPKPKSELYAEPKSEP-KSEPQSE 158
>10_02_0141 +
5761931-5762020,5762170-5762201,5762453-5762604,
5763688-5763770,5764689-5764766,5764884-5764979,
5765076-5765345
Length = 266
Score = 26.2 bits (55), Expect = 9.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 194 NHVAVGPARQERPEEATTRPHPGDRAQGR 280
NH + G ++Q+RP +A + P +GR
Sbjct: 210 NHDSSGLSQQQRPADAERKRRPSQMGRGR 238
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = -1
Query: 129 HCKGLQSGS*VHL-QTSLIWHVDHA-----ACQIQQLHNH 28
H GS + + +TSL+WH + A +CQ ++L +H
Sbjct: 657 HYSDATDGSYIEVKETSLVWHYEEADPDFGSCQAKELQDH 696
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = -2
Query: 176 YSLPEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHD 9
+ L + + GS +++ V R D +++Y+ G ++ +NN +++G HD
Sbjct: 739 FKLNQVCIDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHD 794
>03_02_0733 - 10801380-10802009
Length = 209
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 164 QARSTRNQGQNHVAVGPARQERPEEATTRPHPGD 265
+A + N +NH A A + A RP P D
Sbjct: 136 EADNDGNASENHAAAAEAERREETAAAARPPPAD 169
>01_01_0325 +
2631637-2631882,2632715-2632788,2632874-2633006,
2633091-2633172,2633471-2633580,2633659-2633751,
2633854-2633904,2634013-2634105,2635257-2636129,
2636204-2636316,2636436-2636448
Length = 626
Score = 26.2 bits (55), Expect = 9.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 18 SGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP-CNDYVNTATRHVLLRQGVLGIKVK 194
SG G + G+ R RA K + + P ++ V T +++ R G L +
Sbjct: 57 SGGGGGRRLRHGRGRRARAFRRKLEEENKNSNNRPRASNVVIAYTPNLIRRYGTLLRNIS 116
Query: 195 IMLPWDQQGK 224
+LP+D QGK
Sbjct: 117 FLLPYDGQGK 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,674,999
Number of Sequences: 37544
Number of extensions: 223108
Number of successful extensions: 941
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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