Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323A04f
(405 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 181 9e-46
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 181 9e-46
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 181 9e-46
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 181 9e-46
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 181 9e-46
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 181 9e-46
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 181 9e-46
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 181 9e-46
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 181 9e-46
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 181 9e-46
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 181 9e-46
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 181 9e-46
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 181 9e-46
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 181 9e-46
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 181 9e-46
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 175 6e-44
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 113 3e-25
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.12
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 29 4.5
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 29 4.5
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 29 4.5
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 29 4.5
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 29 4.5
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 29 4.5
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 29 4.5
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 29 4.5
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 29 4.5
EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptoc... 29 5.9
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 29 5.9
BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 5... 29 5.9
BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 5... 29 5.9
BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein. 29 5.9
BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2 (photoly... 29 5.9
BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein. 29 5.9
BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein. 29 5.9
AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein pr... 29 5.9
AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 5... 29 5.9
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 29 5.9
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 29 5.9
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 29 5.9
AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein. 29 5.9
AB089939-1|BAD06471.1| 1039|Homo sapiens N-acetylgalactosaminylt... 29 7.8
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 123 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 182
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 183 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 123 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 182
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 183 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 39 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 98
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 99 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 140
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 181 bits (440), Expect = 9e-46
Identities = 84/102 (82%), Positives = 89/102 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLG
Sbjct: 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183
Query: 183 IKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
IKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 175 bits (425), Expect = 6e-44
Identities = 81/99 (81%), Positives = 86/99 (86%)
Frame = +3
Query: 12 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 191
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 192 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 308
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 113 bits (271), Expect = 3e-25
Identities = 54/65 (83%), Positives = 57/65 (87%)
Frame = +3
Query: 3 RFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLG 182
RFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 68 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVWD 127
Query: 183 IKVKI 197
V +
Sbjct: 128 TSVHL 132
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 155 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 295
CAS RS R Q Q P P A RP PG APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 184 SRSKSCCRGTSKARTARRSHNQTTS 258
SR++S R TSK+R+ARRS ++++S
Sbjct: 131 SRTRSRSRSTSKSRSARRSKSKSSS 155
>EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like
cryptochrome 2 protein.
Length = 593
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 158 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRAR 286
+SQA S + G + GPA +R EA P PG+ RAR
Sbjct: 538 SSQAGSMSSAGPRPLPSGPASPKRKLEAAEEP-PGEELSKRAR 579
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 204 PWDQQGKNGPKKPQPDHILV-TEPKDEPVPLEPTS 305
P +G P+K P LV EPK +P PL P+S
Sbjct: 356 PKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSS 390
>BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 180 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 299
GI V+ + P+ Q K GP PQP I P P P P
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 170
>BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 180 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 299
GI V+ + P+ Q K GP PQP I P P P P
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 170
>BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein.
Length = 176
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 180 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 299
GI V+ + P+ Q K GP PQP I P P P P
Sbjct: 113 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 149
>BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2
(photolyase-like) protein.
Length = 593
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 158 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRAR 286
+SQA S + G + GPA +R EA P PG+ RAR
Sbjct: 538 SSQAGSMSSAGPRPLPSGPASPKRKLEAAEEP-PGEELSKRAR 579
>BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein.
Length = 461
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 158 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRAR 286
+SQA S + G + GPA +R EA P PG+ RAR
Sbjct: 406 SSQAGSMSSAGPRPLPSGPASPKRKLEAAEEP-PGEELSKRAR 447
>BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein.
Length = 228
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 180 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 299
GI V+ + P+ Q K GP PQP I P P P P
Sbjct: 165 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 201
>AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 204 PWDQQGKNGPKKPQPDHILV-TEPKDEPVPLEPTS 305
P +G P+K P LV EPK +P PL P+S
Sbjct: 150 PKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSS 184
>AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 180 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 299
GI V+ + P+ Q K GP PQP I P P P P
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIY---PPSGPAPQYP 170
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 204 PWDQQGKNGPKKPQPDHILV-TEPKDEPVPLEPTS 305
P +G P+K P LV EPK +P PL P+S
Sbjct: 356 PKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSS 390
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 204 PWDQQGKNGPKKPQPDHILV-TEPKDEPVPLEPTS 305
P +G P+K P LV EPK +P PL P+S
Sbjct: 356 PKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSS 390
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 204 PWDQQGKNGPKKPQPDHILV-TEPKDEPVPLEPTS 305
P +G P+K P LV EPK +P PL P+S
Sbjct: 284 PKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSS 318
>AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein.
Length = 589
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 158 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRAR 286
+SQA S + G + GPA +R EA P PG+ RAR
Sbjct: 534 SSQAGSMSSAGPRPLPSGPASPKRKLEAAEEP-PGEELSKRAR 575
>AB089939-1|BAD06471.1| 1039|Homo sapiens
N-acetylgalactosaminyltransferase protein.
Length = 1039
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 221 QERPEEATTRPHPGDRAQGRARAPRA 298
Q P+ TR PG RA RA APRA
Sbjct: 520 QPPPKVYVTRVRPGQRASPRAPAPRA 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,238,527
Number of Sequences: 237096
Number of extensions: 1210541
Number of successful extensions: 7956
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 7711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7954
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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