Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322H12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065958-1|BAC06171.1|  311|Homo sapiens seven transmembrane hel...    29   7.5  
BC104868-1|AAI04869.1|  791|Homo sapiens transient receptor pote...    29   9.9  
BC104866-1|AAI04867.1|  791|Homo sapiens transient receptor pote...    29   9.9  
AY118268-1|AAM80559.1|  791|Homo sapiens vanilloid receptor like...    29   9.9  
AY118267-1|AAM80558.1|  765|Homo sapiens vanilloid receptor like...    29   9.9  
AJ487035-1|CAD31711.2|  790|Homo sapiens vanilloid receptor-like...    29   9.9  
AF514998-1|AAM54027.1|  790|Homo sapiens cation channel TRPV3 pr...    29   9.9  

>AB065958-1|BAC06171.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 412 LASSANIGC*NNAYYTI*NEFLKFDLCGFYFCDMTGLSNLRSS 284
           + +SA+IGC     + +  +F KFD+   YFCD+  +  L  S
Sbjct: 154 ICASAHIGC----MFRV--QFCKFDVINHYFCDLISILKLSCS 190


>BC104868-1|AAI04869.1|  791|Homo sapiens transient receptor
           potential cation channel, subfamily V, member 3 protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 472 VNIEL*VFIYL*VYNEYL*SLASSANIGC*NNAYYT 365
           V + L VF+YL  Y EYL  L  +  +G  N  YYT
Sbjct: 531 VLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYT 566


>BC104866-1|AAI04867.1|  791|Homo sapiens transient receptor
           potential cation channel, subfamily V, member 3 protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 472 VNIEL*VFIYL*VYNEYL*SLASSANIGC*NNAYYT 365
           V + L VF+YL  Y EYL  L  +  +G  N  YYT
Sbjct: 531 VLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYT 566


>AY118268-1|AAM80559.1|  791|Homo sapiens vanilloid receptor like 3
           protein splice variant a protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 472 VNIEL*VFIYL*VYNEYL*SLASSANIGC*NNAYYT 365
           V + L VF+YL  Y EYL  L  +  +G  N  YYT
Sbjct: 531 VLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYT 566


>AY118267-1|AAM80558.1|  765|Homo sapiens vanilloid receptor like 3
           protein splice variant b protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 472 VNIEL*VFIYL*VYNEYL*SLASSANIGC*NNAYYT 365
           V + L VF+YL  Y EYL  L  +  +G  N  YYT
Sbjct: 531 VLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYT 566


>AJ487035-1|CAD31711.2|  790|Homo sapiens vanilloid receptor-like 3
           protein.
          Length = 790

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 472 VNIEL*VFIYL*VYNEYL*SLASSANIGC*NNAYYT 365
           V + L VF+YL  Y EYL  L  +  +G  N  YYT
Sbjct: 531 VLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYT 566


>AF514998-1|AAM54027.1|  790|Homo sapiens cation channel TRPV3
           protein.
          Length = 790

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 472 VNIEL*VFIYL*VYNEYL*SLASSANIGC*NNAYYT 365
           V + L VF+YL  Y EYL  L  +  +G  N  YYT
Sbjct: 531 VLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYT 566


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,162,593
Number of Sequences: 237096
Number of extensions: 1302138
Number of successful extensions: 8825
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8820
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)