Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322H08f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 0.62
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.62
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.62
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.82
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 1.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 1.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 1.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.3
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 5.8
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 5.8
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 5.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.7
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 7.7
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 0.62
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -2
Query: 385 TRHYLTVVN*EGYREYILSMVLESS 311
+++Y+T+++ G+R++I +M+ +S
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMITGTS 34
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 0.62
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -2
Query: 385 TRHYLTVVN*EGYREYILSMVLESS 311
+++Y+T+++ G+R++I +M+ +S
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMITGTS 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.62
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -2
Query: 385 TRHYLTVVN*EGYREYILSMVLESS 311
+++Y+T+++ G+R++I +M+ +S
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMITGTS 107
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.82
Identities = 7/24 (29%), Positives = 19/24 (79%)
Frame = -2
Query: 382 RHYLTVVN*EGYREYILSMVLESS 311
++Y+T+++ G+R++I +M+ +S
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTS 107
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYXTF 255
I+SS +KT+ +K + NNY K+LY + ++I + + Y F
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNF 133
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYXTF 255
I+SS +KT+ +K + NNY K+LY + ++I + + Y F
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNF 133
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYXTF 255
I+SS +KT+ +K + NNY K+LY + ++I + + Y F
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNF 133
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 451 WTQRLGVMCQILTQSCQPHYCI 516
W+ LG +C + + C P Y I
Sbjct: 527 WSHVLGWLCGLSSMLCIPGYMI 548
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 451 WTQRLGVMCQILTQSCQPHYCI 516
W+ LG +C + + C P Y I
Sbjct: 580 WSHVLGWLCGLSSMLCIPGYMI 601
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -3
Query: 447 SWMVYLHSARVFQSLIVLSREPDTI*RLSTEKATESTSLVW 325
SW + +F L++L+ +++ LS + ST+L W
Sbjct: 2 SWQRVFLAVGLFGVLLLLTNADNSVHILSKYQLITSTTLNW 42
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 5.8
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 468 CHVSDSHPIMPTPLL 512
CH D++ ++ TP L
Sbjct: 463 CHADDAYMVVDTPFL 477
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 5.8
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 468 CHVSDSHPIMPTPLL 512
CH D++ ++ TP L
Sbjct: 463 CHADDAYMVVDTPFL 477
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 444 WMVYLHSARVFQSLIVLSRE 385
W++YLH + V +VL E
Sbjct: 424 WIIYLHISDVVADDLVLLEE 443
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 444 WMVYLHSARVFQSLIVLSRE 385
W++YLH + V +VL E
Sbjct: 424 WIIYLHISDVVADDLVLLEE 443
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 423 ARVFQSLIVLSREPDTI*RLSTEKAT 346
A + Q+L L R PDT+ +++ + T
Sbjct: 886 ANLTQTLDKLIRSPDTLRKIAQNRGT 911
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,197
Number of Sequences: 438
Number of extensions: 3306
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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