Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322H07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 210 7e-56
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 37 0.002
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 35 0.006
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 33 0.034
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 32 0.060
SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 28 0.97
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 0.97
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 27 2.2
SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit Cdc... 26 3.0
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 3.0
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 26 3.0
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 26 3.9
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 26 3.9
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 26 3.9
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 25 5.2
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.8
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 25 6.8
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 25 9.0
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 9.0
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 210 bits (514), Expect = 7e-56
Identities = 100/170 (58%), Positives = 129/170 (75%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 185
LKDE PEVRLNIIS LE VN+V+GI+ L QSLLPAIV LAED +WRVRLAII+++PLLA
Sbjct: 371 LKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAIIDYIPLLAQ 430
Query: 186 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 365
QLG EFF+EK+ +LCMSWL DHVY+IREAA NL+KL E +G +WA +IPK L M
Sbjct: 431 QLGVEFFNEKMGNLCMSWLEDHVYSIREAAIKNLRKLTEIFGLEWATETIIPKFLAMRSH 490
Query: 366 QNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAK 515
NYL+RMT +F I+ ++ ++ + +LPT+ + +D + N+RFNVAK
Sbjct: 491 PNYLYRMTTIFAISEIAPALNAEVIEKQILPTLEQLVNDPIPNIRFNVAK 540
Score = 62.9 bits (146), Expect = 3e-11
Identities = 38/168 (22%), Positives = 79/168 (47%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 185
+ D R + +N + +V+G + L+ V L +DT+ VR AI +P
Sbjct: 254 VSDSSWRTRYMVAANFVKLAKVVGPSLIKDELIKPFVLLMKDTEQEVRRAIATQIPGFCE 313
Query: 186 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 365
L + E++ + + D +R A +N+ L Q G + ++P L + +
Sbjct: 314 LLDKRIVLEEIIPVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKD 373
Query: 366 QNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNV 509
+N R+ + + V+++V G ++ ++ LLP ++++A+D VR +
Sbjct: 374 ENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAI 421
Score = 55.6 bits (128), Expect = 4e-09
Identities = 39/172 (22%), Positives = 83/172 (48%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 185
+KD EVR I + + E++ + +++ ++P I EL D VR A+ ++ LA
Sbjct: 293 MKDTEQEVRRAIATQIPGFCELLDKRIVLEEIIPVIQELINDPAQHVRAALGMNIGALAP 352
Query: 186 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 365
QLG+E E L + + L D +R L+ + + G + +++P ++ ++ +
Sbjct: 353 QLGKEKTTEYLLPMFLELLKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAED 412
Query: 366 QNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTL 521
+ + R+ + I +L++ G + + +S +D+V ++R K L
Sbjct: 413 KQWRVRLAIIDYIPLLAQQLGVEFFNEKMGNLCMSWLEDHVYSIREAAIKNL 464
Score = 49.6 bits (113), Expect = 3e-07
Identities = 34/156 (21%), Positives = 69/156 (44%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 185
+ D VR + N+ + +G ++ + LLP +EL +D VRL II + ++
Sbjct: 332 INDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKDENPEVRLNIISKLEVVNK 391
Query: 186 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 365
+G E + L ++ D + +R A + L +Q G ++ + ++ +
Sbjct: 392 VVGIELLSQSLLPAIVTLAEDKQWRVRLAIIDYIPLLAQQLGVEFFNEKMGNLCMSWLED 451
Query: 366 QNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSM 473
Y R + + L+E+ G + T ++P L+M
Sbjct: 452 HVYSIREAAIKNLRKLTEIFGLEWATETIIPKFLAM 487
Score = 47.2 bits (107), Expect = 1e-06
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 1/171 (0%)
Frame = +3
Query: 12 DECPEVRLNIISNLECVNEVIGIQQLVQS-LLPAIVELAEDTKWRVRLAIIEHMPLLAGQ 188
D+ VRL + + EV+ ++ LL + D+ WR R + + LA
Sbjct: 216 DDQDSVRLLSFDIMVSLAEVLKSDSEIRHYLLQPLRSFVSDSSWRTRYMVAANFVKLAKV 275
Query: 189 LGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQ 368
+G ++L + + D +R A + E + +IP + + ++
Sbjct: 276 VGPSLIKDELIKPFVLLMKDTEQEVRRAIATQIPGFCELLDKRIVLEEIIPVIQELINDP 335
Query: 369 NYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTL 521
R I L+ GK+ TT LLP L + D VR N+ L
Sbjct: 336 AQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKDENPEVRLNIISKL 386
Score = 27.1 bits (57), Expect = 1.7
Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 2/135 (1%)
Frame = +3
Query: 3 QLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLA 182
+LK + RLN + L + +G ++ L+P + E +D V A+ + +
Sbjct: 19 ELKHDEITYRLNALERLSTIALALGPERTRDELIPFLDESIDDED-EVLSALADQLGNFV 77
Query: 183 GQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSH 362
+G + L S + +R+ A +L K+ + E +P V +S
Sbjct: 78 DYVGGPEYAHVLLSPLENLAATEETVVRDKAVDSLNKVCICLSQEQLEQYFVPLVQRLST 137
Query: 363 EQNYLHRMTY--LFC 401
+ + R + L+C
Sbjct: 138 AEWFTSRASSAGLYC 152
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 36.7 bits (81), Expect = 0.002
Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVRLAIIEHMPL 176
L +E PEV +I+ ++ + V+G+ + ++ LLP + + + +V+ I+ +
Sbjct: 866 LGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENTIDLVGK 925
Query: 177 LAGQLGQEFFDEKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKV 347
+A + + + +C + L H +IR AA + + GPQ +V+ +
Sbjct: 926 IADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQ----DVLATL 981
Query: 348 LNMSHEQNYLHRMTYLFCINVLSEVC 425
LN Q +R+ I +++E C
Sbjct: 982 LNNLKVQERQNRVCTTVAIAIVAETC 1007
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 35.1 bits (77), Expect = 0.006
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 185
L D VR ++++ L + G + +L ++ DT W +R A E + L+
Sbjct: 601 LADSSSIVRRSLLNALAPLCVFFGKAKSNDLILSHLITYLNDTDWMLRCAFFESITGLSI 660
Query: 186 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVE 302
+G DE + L + LVD A+ E+ + L+E
Sbjct: 661 FIGPRSVDEYILPLMLQALVDPEPAVLESVLGSFSGLIE 699
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 32.7 bits (71), Expect = 0.034
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +3
Query: 27 VRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVR-LAIIEHMPLLAGQLGQEF 203
V LNIIS++ N + ++ + SLLPA+ +L+ + + LA + L+ +
Sbjct: 467 VLLNIISSVIGRNAELDLENPISSLLPALEQLSNYSNREISDLAKDVYKTLIQSK----- 521
Query: 204 FDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQN-YLH 380
D+ SL +S+ + +R L+KL+E+ + V+ ++N+ ++N Y+H
Sbjct: 522 -DD--YSLALSYTQSDLVPVRGQGVYMLRKLIEKKDDRINPVRVLHVLINLLRDENSYVH 578
Query: 381 RMTYLFCINVLSEVCGK 431
L I+ + +C K
Sbjct: 579 ----LNVISAVVSLCDK 591
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 31.9 bits (69), Expect = 0.060
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 333 VIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRV--LLPTVLSMADDNVANVRFN 506
+IP+ + ++ +N R LFC+N + + + + L T ++A D NVR N
Sbjct: 179 MIPRFIELARHENPKIRTDALFCLNQFVLIQSQSLYAHIDTFLETCYALATDVSPNVRKN 238
Query: 507 VAKTL 521
V + L
Sbjct: 239 VCQAL 243
>SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.9 bits (59), Expect = 0.97
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 309 GPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGK 431
GPQ ++NV+P+V+ S E Y + + LSE GK
Sbjct: 456 GPQVHQSNVLPRVIQQSSE--YANTQLQYISLTELSERFGK 494
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 0.97
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = -2
Query: 511 ATLNRTLATLSSAIDNTVGSSTLVVMSLPHTSDSTLMQNKYVILCK*F--CSCDMFSTLG 338
++L+ T + SSAI +V SSTL+ S +T S++ + ++ S ++ S
Sbjct: 719 SSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIVSSTTVSNISSNLPSATA 778
Query: 337 MTLFSAHCGPYCSTSFFRLRVAASRMAYT-----WSTSHDMHKLVSFSSKNSWPSCPASR 173
+ +TS + L ++SR T ++TS + S +S +S S A++
Sbjct: 779 SSQSQLTNSSTLATSLY-LSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANK 837
Query: 172 GMCS-MMARRTLHLVSSASST 113
G+ S + L SS +ST
Sbjct: 838 GVNSNSITSLNLESTSSVTST 858
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 199 SWPSCPASRGMCSMMARRTLHLVSSASSTMAGRRDCTSCWMPITSFTHSRLEIMLS 32
+WPS P SR + +A T+ L S R S +P +TH++LEI+++
Sbjct: 472 NWPSLPHSRLIVVAVAN-TMDLPERILSNRISSRLGLSR-VPFEPYTHTQLEIIIA 525
>SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit
Cdc27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 240 LVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVL 350
L+ VY IRE L K+ ++YG + EN+V P+VL
Sbjct: 120 LLPAVYEIREKDVLYKKEDADKYGFIFNENSV-PRVL 155
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 LFSAHCGPYCSTSFFRLR-VAASRMAYTW 248
LFS C YC FF+LR SR + W
Sbjct: 203 LFSMVCAIYCYVRFFKLRHTPFSRPWWAW 231
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 437 DVLAAH-FGQHVNAEQVRHPVQVVLLVRHVQYFGYDVVLC 321
DVL H + HV+AE+V + V+ V+Y G + C
Sbjct: 151 DVLQIHRYDPHVSAEEVMRALNDVVESGKVRYIGASTMRC 190
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 481 SSAIDNTVGSSTLVVMSLPHTSDSTLMQNKY 389
SS+ DN S+TL + + H S+ Q++Y
Sbjct: 33 SSSFDNEAASTTLGISTAIHASNRPFRQDEY 63
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 3.9
Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Frame = +3
Query: 51 LECVNEVIGIQQLVQSLLPAIVELAEDT---KWRVRLAIIEHMPLLAGQLGQEFFDEKLT 221
+E NE+ G S+ V+ E+T K+ V +++I + L G ++ +
Sbjct: 54 IELANEIFGFNGWSSSIQDIHVDYVEETKEKKFNVGISVIVRVTLKDGSFHEDVGYGSIE 113
Query: 222 SLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWA----ENNVIPKVLNMSHEQ 368
+ C + + +E T LK+ + +G + I K+L M+ Q
Sbjct: 114 N-CRVKALAYEKCKKEGTTDALKRALRNFGSSMGNCLYDKRYIQKILKMAPAQ 165
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 412 CPKCAARTSRPGCCCRPCCLWPTTMLPTCGSML 510
CP C R CC CL T CG+ L
Sbjct: 368 CPTCDRVVERIDGCCHMNCLCGTHFCFLCGAYL 400
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 25.4 bits (53), Expect = 5.2
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +3
Query: 330 NVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNV 509
N++ V+N HR T L C+N + I +R L LS N ANVRF V
Sbjct: 358 NMLKLVVNSEENAVQRHRSTILACLNDVD----SSIQSRAL---ELSTFLVNEANVRFMV 410
Query: 510 AKTL 521
+ L
Sbjct: 411 RELL 414
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +1
Query: 136 SGGSVWPSSST---CLYWRDSWARSSSTRS 216
SGGSV+P++ST + W S + +++T S
Sbjct: 147 SGGSVYPTNSTTNSSISWNSSTSAATNTSS 176
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 60 VNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKL 218
+ V G++Q+ +P I + LA E MP+L +G E DE++
Sbjct: 648 IGRVAGLRQI--DCIPGIENIDVTNLVSGHLAYRESMPILLAAVGFEVLDEEV 698
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 6 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVEL 122
+K C E + + S LE N + + Q+LLP + +L
Sbjct: 1047 IKHFCSEPQKVVNSQLELHNSAYSLDAISQNLLPMLKDL 1085
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 392 VRHPVQVVLLVRHVQYFGYDVVLCPLRPVLL 300
+R + ++L V H + GY V CP V +
Sbjct: 394 LRQAIGLILGVLHTVFSGYTTVWCPQNAVFV 424
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,182,557
Number of Sequences: 5004
Number of extensions: 45689
Number of successful extensions: 156
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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