Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322H06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for ... 32 1.4
Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for ... 32 1.4
M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common ant... 32 1.4
AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosph... 32 1.4
AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosph... 32 1.4
AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosph... 32 1.4
AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosph... 32 1.4
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 30 5.7
L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 29 9.9
CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 29 9.9
BC063798-1|AAH63798.1| 929|Homo sapiens SCY1-like 2 (S. cerevis... 29 9.9
BC012387-1|AAH12387.3| 505|Homo sapiens SCYL2 protein protein. 29 9.9
BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 29 9.9
BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 29 9.9
AK027551-1|BAB55194.1| 756|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK024274-1|BAB14869.1| 735|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK001597-1|BAA91778.1| 446|Homo sapiens protein ( Homo sapiens ... 29 9.9
AB037781-1|BAA92598.1| 796|Homo sapiens KIAA1360 protein protein. 29 9.9
>Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for
leukocyte common antigen (T200). ).
Length = 1304
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 1106 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1165
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 1166 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1204
>Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for T200
leukocyte common antigen (CD45, LC-A). ).
Length = 1143
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 945 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1004
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 1005 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1043
>M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common antigen
precursor protein.
Length = 1114
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 916 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 975
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 976 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1014
>AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 1108 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1167
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 1168 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1206
>AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 947 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1006
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 1007 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1045
>AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 1108 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1167
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 1168 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1206
>AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 22 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 201
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 947 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1006
Query: 202 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 315
Q G F L+ L T V + + KA RK
Sbjct: 1007 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1045
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +1
Query: 10 FLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIH 189
+L+ +E D++++ Q + E+ + D+L + NEL + + K+ MIH
Sbjct: 84 YLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIH 143
Query: 190 EELVQLMKWKQARGKFYPQLSYLIK-VNTPRAVMQET 297
EL + ++++ + + +L L + + + QET
Sbjct: 144 TELKAVRQFQKRKIQVERELDDLKENLRNTERIHQET 180
>L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha
protein.
Length = 598
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 58 PQAIKLKAERKTKRPDELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQARG 231
P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G
Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187
Query: 232 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 342
L L P A+ K F+KLP+I +T
Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221
>CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein.
Length = 598
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 58 PQAIKLKAERKTKRPDELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQARG 231
P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G
Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187
Query: 232 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 342
L L P A+ K F+KLP+I +T
Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221
>BC063798-1|AAH63798.1| 929|Homo sapiens SCY1-like 2 (S.
cerevisiae) protein.
Length = 929
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 154 IKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 333
++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S
Sbjct: 669 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 728
Query: 334 AMTALS 351
++T+LS
Sbjct: 729 SLTSLS 734
>BC012387-1|AAH12387.3| 505|Homo sapiens SCYL2 protein protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 154 IKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 333
++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S
Sbjct: 245 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 304
Query: 334 AMTALS 351
++T+LS
Sbjct: 305 SLTSLS 310
>BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 58 PQAIKLKAERKTKRPDELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQARG 231
P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G
Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187
Query: 232 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 342
L L P A+ K F+KLP+I +T
Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221
>BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 58 PQAIKLKAERKTKRPDELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQARG 231
P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G
Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187
Query: 232 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 342
L L P A+ K F+KLP+I +T
Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221
>AK027551-1|BAB55194.1| 756|Homo sapiens protein ( Homo sapiens
cDNA FLJ14645 fis, clone NT2RP2001839, weakly similar to
SCY1 PROTEIN. ).
Length = 756
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 154 IKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 333
++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S
Sbjct: 496 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 555
Query: 334 AMTALS 351
++T+LS
Sbjct: 556 SLTSLS 561
>AK024274-1|BAB14869.1| 735|Homo sapiens protein ( Homo sapiens
cDNA FLJ14212 fis, clone NT2RP3003500, weakly similar to
SCY1 PROTEIN. ).
Length = 735
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 154 IKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 333
++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S
Sbjct: 475 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 534
Query: 334 AMTALS 351
++T+LS
Sbjct: 535 SLTSLS 540
>AK001597-1|BAA91778.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ10735 fis, clone NT2RP3001407, weakly similar to
SCY1 PROTEIN. ).
Length = 446
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 154 IKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 333
++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S
Sbjct: 186 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 245
Query: 334 AMTALS 351
++T+LS
Sbjct: 246 SLTSLS 251
>AB037781-1|BAA92598.1| 796|Homo sapiens KIAA1360 protein protein.
Length = 796
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 154 IKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 333
++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S
Sbjct: 536 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 595
Query: 334 AMTALS 351
++T+LS
Sbjct: 596 SLTSLS 601
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.132 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,342,896
Number of Sequences: 237096
Number of extensions: 1652752
Number of successful extensions: 3508
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3508
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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