Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322H05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   1.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.8  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   7.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.7  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 139 FSATTPSFQRGGNDLLNLLARQEPRAADPAPNSTEME-DILLNMRLNG 279
           FSAT  +      +L    + ++P+  +P P  T  + + +L+M L G
Sbjct: 15  FSATLDTVVPNSGELFKAGSAEQPKEQEPLPPVTPPQGENMLDMDLRG 62


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 422 SKVSIISPFLAPDTLELSF 366
           ++++ +SP   PD++EL F
Sbjct: 605 NRITELSPLSVPDSVELLF 623


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 13 NFNMEDEKP 39
          NF++EDEKP
Sbjct: 51 NFDVEDEKP 59


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 13 NFNMEDEKP 39
          NF++EDEKP
Sbjct: 51 NFDVEDEKP 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.130    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,008
Number of Sequences: 438
Number of extensions: 2858
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)