Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322H02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical ... 81 5e-16
Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 30 1.2
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 29 2.0
Z75542-3|CAA99860.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical pr... 28 4.7
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 4.7
U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical pr... 28 4.7
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 28 4.7
AC084197-48|AAY43983.1| 250|Caenorhabditis elegans Hypothetical... 28 4.7
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.2
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.2
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.2
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.2
Z81109-5|CAB03251.1| 588|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z32679-9|CAA83593.3| 337|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical
protein T08B2.8 protein.
Length = 159
Score = 81.0 bits (191), Expect = 5e-16
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Frame = +2
Query: 5 RVFLPNFWMKLVRPHP---KQLP-NIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKIN 172
RVFLP+FWM +V +LP N V F M+++DI+ YL KIY++PV DVRT++
Sbjct: 17 RVFLPDFWMAVVESPSVGRNRLPRNCVKFEVDPRMSRHDIREYLTKIYDLPVRDVRTEVQ 76
Query: 173 MGKF----KKD-VVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDES 337
MG K D K + K++D K+A+V + K F YP +FE ++ E+ E K++ +
Sbjct: 77 MGDITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQMFE-ALEEDLELVKAMKQQ 135
Query: 338 KK 343
++
Sbjct: 136 EE 137
>Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical
protein F59D12.3 protein.
Length = 356
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 161 TKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSL 328
TKIN+GK K V + K++ K AF ++ F+ + FEK + + +S+
Sbjct: 33 TKINLGKVKTTVEAPFKNKKNRKKSAFPNKQRSRFFQTFNRFEKLLRGNYNYLRSI 88
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 65 NIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVK 202
N + F S + KY IK+ + K+Y V + V T I + KK V+
Sbjct: 85 NTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVR 130
>Z75542-3|CAA99860.1| 359|Caenorhabditis elegans Hypothetical
protein F55D12.3 protein.
Length = 359
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 35 LVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVI 214
++ + K+ N + +C TKY Y+E I + V+ ++TK ++ F +VI
Sbjct: 285 ILTEYQKKYSNTLFHYCRTVNTKYGPSRYIEIISLINVI-LKTKSDVDNFSNIF---HVI 340
Query: 215 KEDDVK 232
+ +DVK
Sbjct: 341 QPEDVK 346
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 245 TLPKTMTFKYPDLFEKSINEEE---EHA-KSLDESKKNFRKYID 364
T K+ F+ E INE E +HA K+ ++++KN R+Y+D
Sbjct: 1621 TKAKSELFRVKKKLEADINELEIALDHANKANEDAQKNIRRYLD 1664
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 245 TLPKTMTFKYPDLFEKSINEEE---EHA-KSLDESKKNFRKYID 364
T K+ F+ E INE E +HA K+ ++++KN R+Y+D
Sbjct: 1621 TKAKSELFRVKKKLEADINELEIALDHANKANEDAQKNIRRYLD 1664
>Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical
protein ZK1128.3 protein.
Length = 360
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +2
Query: 179 KFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKK 343
K ++ ++G + V + VT+PK + F+ L ++ + E H DE+++
Sbjct: 47 KNRRQRMEGLENVDQTVDLQLVTVPKVVPFRASRLLQEIYDRERVHGMRRDEARQ 101
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 245 TLPKTMTFKYPDLFEKSINEEE---EHA-KSLDESKKNFRKYID 364
T K+ F+ E INE E +HA K+ ++++KN R+Y+D
Sbjct: 1621 TKAKSELFRVKKKLEADINELEIALDHANKANEDAQKNIRRYLD 1664
>U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical
protein T03F1.6a protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 62 PNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVR 160
PN+ HFHCS+ + D+ + PV R
Sbjct: 290 PNLQHFHCSLPHDEIDLSQEFLALLNEPVRKTR 322
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 245 TLPKTMTFKYPDLFEKSINEEE---EHA-KSLDESKKNFRKYID 364
T K+ F+ E INE E +HA K+ ++++KN R+Y+D
Sbjct: 121 TKAKSELFRVKKKLEADINELEIALDHANKANEDAQKNIRRYLD 164
>AC084197-48|AAY43983.1| 250|Caenorhabditis elegans Hypothetical
protein Y73B6BL.44 protein.
Length = 250
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 185 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSL-DESKK 343
+K V+ KE V LP+ K D++EK+INE+ + K D+ KK
Sbjct: 100 EKSVILRKSRKECKVPSVVQALPEKYQKKISDIWEKNINEKVKKEKDCWDQQKK 153
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 320 KSLDESKKNFRKYIDHNKSRPDIPSWFSI 406
K D K+ F + +D N + IPSWF +
Sbjct: 425 KIKDYGKRIFEEVVDENSRQVYIPSWFVV 453
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 320 KSLDESKKNFRKYIDHNKSRPDIPSWFSI 406
K D K+ F + +D N + IPSWF +
Sbjct: 425 KIKDYGKRIFEEVVDENSRQVYIPSWFVV 453
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 152 DVRTKINMGKFKKDVVKGYVIKED 223
DV ++NMGKF+ + GY++K D
Sbjct: 847 DVYMQLNMGKFEYNGGSGYLLKPD 870
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 152 DVRTKINMGKFKKDVVKGYVIKED 223
DV ++NMGKF+ + GY++K D
Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 152 DVRTKINMGKFKKDVVKGYVIKED 223
DV ++NMGKF+ + GY++K D
Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 152 DVRTKINMGKFKKDVVKGYVIKED 223
DV ++NMGKF+ + GY++K D
Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871
>Z81109-5|CAB03251.1| 588|Caenorhabditis elegans Hypothetical
protein R10D12.8 protein.
Length = 588
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 71 VHFHCSMEMTKYDIKNYLEK 130
+HFHC + TKYD +K
Sbjct: 63 IHFHCLTQNTKYDFFQIFDK 82
>Z32679-9|CAA83593.3| 337|Caenorhabditis elegans Hypothetical
protein C05B5.5 protein.
Length = 337
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +2
Query: 101 KYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTM----TF 268
+YDIKNY E E + R +++ + +K + + +++ F LP +
Sbjct: 107 QYDIKNYYENPEEAFLFAFRNALSIFNVQNSKLKRFYLAPSKLEL-FFKLPYSFIDGRNC 165
Query: 269 KYPDLFEKSINEEEEHAKSLDESKKNFRK 355
+ ++ K N+E+E S++ +K K
Sbjct: 166 ENLSIWNKKANDEDERDFSINFAKAVLEK 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,212,798
Number of Sequences: 27780
Number of extensions: 162932
Number of successful extensions: 577
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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