Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322G11f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.5  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   4.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
 Frame = -1

Query: 455 CLY--HIFLI*GTCTFHLCTCESRC 387
           C Y  H F +   C F  C CE  C
Sbjct: 737 CRYEAHCFALCHCCDFDACDCEMTC 761



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 367  WNADSFWQRLSH 402
            WN   FW+RL +
Sbjct: 1191 WNEKRFWERLRY 1202


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 329 ISQFMKERKLTSLGMPTHFGSGSHMYK 409
           ISQ +  ++L +LG      S SH YK
Sbjct: 43  ISQPIPNQELQNLGASYDIESNSHQYK 69


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 320 KDDISQFMKERKLTSLGMPTHFGSGSHMYKGEKYRYLILE 439
           +DDIS+F+K+R      +      G     G+K + L+ E
Sbjct: 20  QDDISKFLKDRPYVQKQLHCILDRGHCDVIGKKIKELLPE 59


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 329 ISQFMKERKLTSLGMPTHFGSGSHM 403
           +S F+  R    + MPT  G G HM
Sbjct: 187 LSDFVIHRSPELVPMPTLKGDGRHM 211


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +2

Query: 353 KLTSLGMPTHFGSGSHMYKGEKYRYLILERYGKDIWKHFPGESEVI 490
           K  S G P  F   + +Y+ +        R G  I    P ES  I
Sbjct: 623 KRVSAGTPAAFNISTTIYENQNCLDASSSRRGSKIGSPTPAESTFI 668


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,471
Number of Sequences: 438
Number of extensions: 4175
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)