Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322G07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0110 + 20910084-20910187,20910255-20910303,20911334-209114... 73 2e-13
03_04_0032 - 16663018-16663026,16663072-16663235,16663384-166635... 72 2e-13
10_07_0091 - 12774590-12774664,12774971-12775134,12775249-127753... 71 4e-13
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 30 1.3
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 30 1.3
06_03_0219 - 18227559-18227858,18227864-18228340 29 1.7
03_03_0105 + 14491198-14493636,14494793-14494957,14495647-144957... 29 1.7
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911... 29 2.3
06_03_1053 + 27224824-27225618 29 3.0
01_01_1195 - 9567023-9567789,9567871-9568120 29 3.0
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 26 3.7
09_04_0416 - 17399059-17399777,17400560-17400704 28 4.0
09_04_0072 + 14323449-14324274,14324351-14324447,14325175-143252... 28 4.0
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 28 4.0
02_05_0211 - 26800089-26800439,26800458-26800649,26800721-268007... 28 4.0
05_07_0219 - 28474661-28475146,28475979-28476644 28 5.2
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 28 5.2
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 27 6.9
04_03_0969 + 21331989-21332674,21333090-21333194,21333269-213333... 27 6.9
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747... 27 6.9
08_01_0908 + 8957450-8957584,8957630-8957785 27 9.1
>03_05_0110 +
20910084-20910187,20910255-20910303,20911334-20911442,
20911597-20911690,20912253-20912386,20912519-20912682,
20912818-20912889
Length = 241
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/87 (39%), Positives = 52/87 (59%)
Frame = +1
Query: 232 KEREGEPAGDPKLYLQEALLERKLPELDMRQLVDLPHGLDYNEWLASHTLALFDHVNLVY 411
+ ++ P+G L++ + + L ++R+ V LP G D NEWLA +T+ F+ VNL+Y
Sbjct: 41 RPKKSAPSGSKGAQLRKHI-DATLGSGNLREAVRLPPGEDINEWLAVNTVDFFNQVNLLY 99
Query: 412 GTVSEFCTAATCPDMTGPGGRSYAWYD 492
GT++EFCT +CP MT Y W D
Sbjct: 100 GTLAEFCTPESCPTMTAGPKYEYRWAD 126
>03_04_0032 -
16663018-16663026,16663072-16663235,16663384-16663517,
16664300-16664393,16667458-16667566,16668441-16668489,
16668622-16668647
Length = 194
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +1
Query: 232 KEREGEPAGDPKLYLQEALLERKLPELDMRQLVDLPHGLDYNEWLASHTLALFDHVNLVY 411
+ ++ P+G L L++ + + L ++R+ V LP G D NEWLA +T+ F+ VN +Y
Sbjct: 15 RPKKSSPSGSKGLPLKKHI-DATLGSGNLREAVRLPIGEDLNEWLAVNTVDFFNQVNFLY 73
Query: 412 GTVSEFCTAATCPDMTGPGGRSYAWYD 492
GT+ EFCT++TCP M+ Y W D
Sbjct: 74 GTLMEFCTSSTCPIMSAGPKYEYRWAD 100
>10_07_0091 - 12774590-12774664,12774971-12775134,12775249-12775382,
12775463-12775556,12775650-12775758,12776055-12776103,
12778336-12778376,12779539-12779571,12779665-12779754,
12780474-12780507,12781218-12781510,12781859-12782057,
12782129-12782289,12783130-12783282,12783545-12783715,
12783822-12783921,12784023-12784111,12784192-12784290,
12784406-12784676,12784764-12784961,12785041-12785140,
12785799-12785931,12786016-12786277,12787106-12787155
Length = 1033
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +1
Query: 232 KEREGEPAGDPKLYLQEALLERKLPELDMRQLVDLPHGLDYNEWLASHTLALFDHVNLVY 411
+ ++ P+G+ + L++ + + L ++R V LP G D NEWLA +T+ F+ VN++Y
Sbjct: 832 RPKKNAPSGNKGVQLKKHI-DATLGSGNLRDAVRLPPGEDLNEWLAVNTVDFFNQVNILY 890
Query: 412 GTVSEFCTAATCPDMTGPGGRSYAWYD 492
GT+ EFCT TCP M+ Y W D
Sbjct: 891 GTLMEFCTPTTCPTMSAGPKFEYRWAD 917
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -1
Query: 257 PAGSPSRSFRRAFATSPPRKATGPPPMSLILRWQESKRESRA*GGGDRPTMPPERSITCT 78
P S S S A A PP+ A P P ++ + ++ A P PE +T
Sbjct: 2 PQASSSSSPATAAAPPPPQPAADPSPSAVPASEEALDPQTPA----PPPQAQPEAVLTAA 57
Query: 77 TRALVSGSVRPP 42
+AL S RPP
Sbjct: 58 QKALRSKPTRPP 69
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 248 SPSRSFRRAFATSPPRKATGPPPMSLILRWQESKRESRA*GGGDRPTMPPER 93
SP +S+ R+ + + R++ P P S LR +S+RE GDR ER
Sbjct: 91 SPKQSWSRSPSPARKRESWSPSPQSKRLRRAQSEREGADATEGDRRKTTRER 142
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 257 PAGSPSRSFRRAFATSPPRKATGPPPMSLILRW 159
PA + + RR A SPP + PPP L LR+
Sbjct: 78 PAACAASTVRRPAAPSPPPASPPPPPPRLALRF 110
>03_03_0105 + 14491198-14493636,14494793-14494957,14495647-14495760,
14496223-14496487,14497164-14497237,14497851-14497928
Length = 1044
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 241 EGEPAGDPKLYLQEALLER--KLPELDMRQLVDLPHG 345
E P GDP YL LL R K +D +L+D+P G
Sbjct: 971 ENVPEGDPAQYLVAELLCRAAKKNGMDFHELLDIPQG 1007
>11_04_0442 - 17790811-17790889,17791047-17791114,17791144-17791166,
17791210-17795913,17797414-17797624,17798478-17798666
Length = 1757
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 211 LVAKARRKEREGEPAGDPKLYLQEALLERKLPELDMRQLVDLPHGLDYNEWLASHTLALF 390
LVA+ R ++ LYL++ E PE V LP+G EW+++ + L
Sbjct: 1315 LVARHLRNHKDSATISRIYLYLKDCNWE---PENKTSNWVWLPNGSGSGEWVSAPSCVLH 1371
Query: 391 DHVNL 405
D NL
Sbjct: 1372 DRDNL 1376
>06_03_1053 + 27224824-27225618
Length = 264
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +1
Query: 46 GRTEPETSAR---VVHVM--LRSGGMVGLSPPPHAR 138
GRT ET AR +V + L + G +GL PPPH R
Sbjct: 49 GRTYEETRARYPLLVEAVEALAAAGELGLPPPPHVR 84
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 218 ATSPPRKATGPPPMSLILRWQESKRESRA*GGGDRPTMPPERSITCTT-RALVSGSVRPP 42
A+ P A PPP ++ R S+ G E + TCTT +L SGS
Sbjct: 167 ASPAPAPAPPPPPQPVVALHHHHHRYSQQYSGYSGAAESDESASTCTTDLSLSSGSAAAA 226
Query: 41 SAVQRAS 21
+A A+
Sbjct: 227 AAAAAAA 233
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 206 PRKATGPPPMSLILRWQESKRESRA*GGGDRPTMPPERSITCTTRALVSGSVRPPSAVQR 27
P+ PPP L + Q+ + + A G D +PPE RAL + +A R
Sbjct: 59 PQPQPQPPPPPLPPQQQQQEPAAGAGAGADFSALPPE----LVHRALAAAGASDVAAASR 114
Query: 26 A 24
A
Sbjct: 115 A 115
Score = 20.6 bits (41), Expect(2) = 3.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -1
Query: 260 SPAGSPSRSFRRAFATSPPRKATGPPP 180
+P+ P S R PP + PPP
Sbjct: 12 TPSPPPFSSRPRVVGPPPPPPSDPPPP 38
>09_04_0416 - 17399059-17399777,17400560-17400704
Length = 287
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 224 AFATSPPRKATGPPPMSLI--LRWQESKRESRA*GGGDRPTMPPERSITCTTRALVSG 57
A A PPR+ TGP P LR + + E G G+ + P R + T +V G
Sbjct: 99 AMAMQPPRRKTGPAPTMTTQPLRIRIGRGEEEGRGRGEL-EVDPRRRLGHTAATVVGG 155
>09_04_0072 +
14323449-14324274,14324351-14324447,14325175-14325277,
14325359-14325412,14325495-14325569,14325597-14325650,
14325687-14325755,14325840-14325923,14326115-14326312,
14326428-14326927,14327011-14327140,14328226-14328317,
14328776-14328954,14329114-14329316,14329398-14329499,
14330047-14330209,14330690-14330979,14331088-14331225,
14331311-14331390,14331510-14331606,14331685-14331814,
14331921-14332162
Length = 1301
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 266 FGSPAGSPSRSFRRAFATSPPRKATGPPP 180
F SP PS S AT PP PPP
Sbjct: 27 FSSPTAKPSPSPLNPRATKPPLAVPSPPP 55
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -1
Query: 182 PMSLILRWQESKRESRA*GGGDRPTMPPERSITC---TTRALVSG--SVRPPSAV 33
P + +L+W + GGG++ P E++ + R L +G +RPP AV
Sbjct: 53 PATPLLKWDVGNGAEKGGGGGEKAGGPSEKAAAARDVSVRRLAAGVWRLRPPEAV 107
>02_05_0211 -
26800089-26800439,26800458-26800649,26800721-26800792,
26800941-26801126
Length = 266
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 127 AAATGRPCLPSAASHALPGRWSLAQC 50
AAA R CLP ASH + W A C
Sbjct: 44 AAALCRHCLPHDASHGVLQIWKYASC 69
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = -1
Query: 260 SPAGSPSRSFRRAFATSPPRKATGPPPMSLILRWQESKRESRA*GGG 120
SPA S SR+ +P PPP S L W + G G
Sbjct: 92 SPATSSSRTATATATATPTSPTPTPPPTSATLLWPRPRPTKEEEGEG 138
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 263 GSPAGSPSRSFRRAFATSPPRKATGPPPMSLILRWQE 153
G+ +P R+ RA SPP A PPP + + Q+
Sbjct: 1029 GAVPPTPRRAALRATTRSPPAVAATPPPRERVQQQQQ 1065
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 248 SPSRSFRRAFATSPPRK--ATGPPPMSLILRWQESKRESRA*GGGDR 114
SP ++ R+ + SP RK + P P S LR +S+RE GDR
Sbjct: 304 SPKQAQSRSRSPSPARKRESRSPSPRSKRLRRAQSEREGADATEGDR 350
>04_03_0969 +
21331989-21332674,21333090-21333194,21333269-21333391,
21333458-21333628,21333710-21333839,21333926-21334135,
21334700-21334855
Length = 526
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 211 LVAKARRKEREGEPAGDPKLYLQEALLERKLPELDMRQLVDLP 339
LVA RR+ R G P L+L A+ K P + + ++P
Sbjct: 41 LVASRRRRRRRGVAVATPVLHLATAVAPPKHPGKPPKDIQEVP 83
>02_05_1272 +
35373843-35374031,35374343-35374490,35374586-35374704,
35374992-35375121,35375122-35375201
Length = 221
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = -1
Query: 467 PGPVMSGHVAAVQNSDTVPYTRFTWSNSASVCEASH 360
P ++ + Q PY F WSN+ +C H
Sbjct: 163 PVEILEALQSCKQPGSNKPYISFPWSNAEKLCTGKH 198
>08_01_0908 + 8957450-8957584,8957630-8957785
Length = 96
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 257 PAGSPSRSFRRAFATSPPRKATGPPPMSLILRWQESKRES 138
PAG P+R R +AT P + P+ +I + S ES
Sbjct: 18 PAGWPARGIRCYYATEPKGRKPKTAPLQVIAEIRVSYLES 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,359,745
Number of Sequences: 37544
Number of extensions: 300940
Number of successful extensions: 1414
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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