Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322G07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical ... 68 4e-12
Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 31 0.38
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 28 3.5
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 28 4.7
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 322 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 501
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 130 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 189
Query: 502 KK 507
K+
Sbjct: 190 KR 191
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 322 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 501
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 130 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 189
Query: 502 KK 507
K+
Sbjct: 190 KR 191
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 322 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 501
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 104 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 163
Query: 502 KK 507
K+
Sbjct: 164 KR 165
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 322 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 501
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 94 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 153
Query: 502 KK 507
K+
Sbjct: 154 KR 155
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 322 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 501
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 121 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 180
Query: 502 KK 507
K+
Sbjct: 181 KR 182
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 322 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 501
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 80 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 139
Query: 502 KK 507
K+
Sbjct: 140 KR 141
>AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical
protein T12B3.4 protein.
Length = 292
Score = 68.1 bits (159), Expect = 4e-12
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +1
Query: 310 LDMRQLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWY 489
+D+R V LP ++++WLA HT+ F+ +NL+YGT+S+ CT +CP M G Y W
Sbjct: 102 VDLRHAVKLPPSENFDDWLAVHTVDFFNRINLMYGTISDVCTRESCPTMCGGSRYEYLWQ 161
Query: 490 D 492
D
Sbjct: 162 D 162
>Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical
protein F38H4.10 protein.
Length = 193
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 313 DMRQLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEF-CTAATCPDMTGPGGRSYAWY 489
++R + LP G D NEWLA + + L + V +V+G + E CT + CP MT GR Y W
Sbjct: 21 NLRDALKLPPGEDKNEWLAVNIIDLVNQVRMVFGVLCESECTDSKCPSMTA-HGRQYTWT 79
Query: 490 DE 495
E
Sbjct: 80 SE 81
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = -1
Query: 230 RRAFATSPPRKATGPPPMSLILRWQESKRESRA*GGGDRPTMPPERSITCTTRALVSGSV 51
RR + PP + PPP S+ + + G PT + ++T + +V+ S+
Sbjct: 3 RRKLPSIPPNSSAFPPPTSVTTNVISTDTSMPSTSSGPAPTYVDDYNVTLPSDPIVAESL 62
Query: 50 RPPSAVQRASQH 15
++ R QH
Sbjct: 63 LKGGSLTRRHQH 74
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = -1
Query: 230 RRAFATSPPRKATGPPPMSLILRWQESKRESRA*GGGDRPTMPPERSITCTTRALVSGSV 51
RR + PP + PPP S+ + + G PT + ++T + +V+ S+
Sbjct: 3 RRKLPSIPPNSSAFPPPTSVTTNVISTDTSMPSTSSGPAPTYVDDYNVTLPSDPIVAESL 62
Query: 50 RPPSAVQRASQH 15
++ R QH
Sbjct: 63 LKGGSLTRRHQH 74
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 263 GSPAGSPSR-SFRRAFATSPPRKATGPPPMS 174
G+ +G PSR R + PPR+++G PP S
Sbjct: 292 GTTSGPPSRLRGRMSHPMGPPRRSSGAPPSS 322
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 263 GSPAGSPSR-SFRRAFATSPPRKATGPPPMS 174
G+ +G PSR R + PPR+++G PP S
Sbjct: 292 GTTSGPPSRLRGRMSHPMGPPRRSSGAPPSS 322
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 154 SCHR-KIRLIGGGPVAFLGGLVAKARRKEREGEPAGDPKLYLQEALLERKLPELDMRQLV 330
SC + KI + P AFL + R E P G P++YL +P L +
Sbjct: 84 SCSKPKITPVWKAPSAFLKPWSPRKRFSSVETNP-GTPRIYLPPPPRPPPVPPLSPPERP 142
Query: 331 DLPH 342
D+PH
Sbjct: 143 DIPH 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,698,789
Number of Sequences: 27780
Number of extensions: 190711
Number of successful extensions: 589
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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