Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322G07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.47 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.62 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 257 PAGSPSRSFRRAFATSPPRKATGPPP 180
           P  SP +S +     SPP  + GPPP
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPP 48


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 HVNLVYGTVSEFCTAATCPDMTGPGG 471
           +VN +Y + ++F T  T     GPGG
Sbjct: 379 YVNSMYASGAQFATPCTPSPPRGPGG 404


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -1

Query: 95   RSITCTTRALVSGSVRPPSAVQRASQHANSS 3
            RS+       VSGS  PP    R     NSS
Sbjct: 1843 RSVGSARNIPVSGSPEPPPPPPRNHDQNNSS 1873


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 118 SPPPHARLSLFDSCHRKIRLIGGG 189
           +P  HA+ SL D    ++ + GGG
Sbjct: 265 TPRSHAKPSLIDDEPTEVTIGGGG 288


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 118 SPPPHARLSLFDSCHRKIRLIGGG 189
           +P  HA+ SL D    ++ + GGG
Sbjct: 265 TPRSHAKPSLIDDEPTEVTIGGGG 288


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 111 DHASRAQHHMHYP 73
           D + R QHH  YP
Sbjct: 343 DSSFRIQHHFFYP 355


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 139 VGREAAATGRPCLPSAASHALPG 71
           V +++   G PC PS     +PG
Sbjct: 41  VQQQSQQAGDPCDPSLLRQGVPG 63


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 118 SPPPHARLSLFDSCHRKIRLIGGG 189
           +P  HA+ SL D    ++ + GGG
Sbjct: 265 TPRSHAKPSLIDDEPTEVTIGGGG 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,372
Number of Sequences: 438
Number of extensions: 2071
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)