Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322G02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46240-2|CAA86311.1|  213|Caenorhabditis elegans Hypothetical pr...    55   4e-08
Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical pr...    38   0.004
Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical pr...    38   0.004
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    29   2.7  
Z78198-8|CAB01574.2|  333|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL021503-3|CAA16423.1|  324|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z46240-2|CAA86311.1|  213|Caenorhabditis elegans Hypothetical
           protein B0272.2 protein.
          Length = 213

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = +2

Query: 152 METLYHQTNQLLQETTDLFNKLE--RDPANHQQIENAIQSKINTVNANCEKLDIYVFKTP 325
           ME LY  TN LLQ+      +LE  ++  + Q +   I   + T+  NC+ LD YV + P
Sbjct: 1   MEALYQSTNFLLQKVQHDLGRLEGTQNEQDAQVVVQCIYGDVITLKENCQTLDNYVSREP 60

Query: 326 INQRSMAKMRVDQLKYD 376
             +R  A+MRVDQL+ D
Sbjct: 61  PARRQAARMRVDQLRAD 77


>Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
 Frame = -2

Query: 406 IYKRSLYVFVIILQLVHSHFSHRPLIYWCFKNINI*FFTVRIDCVYL*LNCIFYLLVIGW 227
           +  +S+Y+F +   L  +H S +P+  W F   N+ + T  +  +Y  L   F + +   
Sbjct: 318 LVSQSIYLFSMWFALKLAHPSAQPVAAWVFFTSNLAWTTSILTAIYTRLRSGFDVKIQSI 377

Query: 226 ISL*FIKKICSFL*QLICLMV*CFH---IGNVFF*IGFQIISVVIYIKLFII 80
           IS  F   +C  L  LI L +  F+   +  +FF +  QI+ +V++I+  +I
Sbjct: 378 ISCVFFTMLCYALAWLIVLQISHFNTRVLTAIFFILAQQIL-IVMFIRHSLI 428


>Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
 Frame = -2

Query: 406 IYKRSLYVFVIILQLVHSHFSHRPLIYWCFKNINI*FFTVRIDCVYL*LNCIFYLLVIGW 227
           +  +S+Y+F +   L  +H S +P+  W F   N+ + T  +  +Y  L   F + +   
Sbjct: 318 LVSQSIYLFSMWFALKLAHPSAQPVAAWVFFTSNLAWTTSILTAIYTRLRSGFDVKIQSI 377

Query: 226 ISL*FIKKICSFL*QLICLMV*CFH---IGNVFF*IGFQIISVVIYIKLFII 80
           IS  F   +C  L  LI L +  F+   +  +FF +  QI+ +V++I+  +I
Sbjct: 378 ISCVFFTMLCYALAWLIVLQISHFNTRVLTAIFFILAQQIL-IVMFIRHSLI 428


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
            anchorage protein1 protein.
          Length = 8545

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +2

Query: 152  METLYHQTNQLLQETTDLFNKLERDP--ANHQQIENAIQSKINTVNANCE---KLDIYVF 316
            + TL  +    +Q+  D   K + D   A H     ++QSK+ +V+ N E   KL+  + 
Sbjct: 2556 LSTLLSEDRSKIQQAIDSLRKKKSDSDLAQHALEALSVQSKLPSVSINLEELKKLEETLS 2615

Query: 317  KTPINQRSMAKMRVDQLK 370
              P+    + + ++ +LK
Sbjct: 2616 TVPVEDSKVIRDKIAELK 2633


>Z78198-8|CAB01574.2|  333|Caenorhabditis elegans Hypothetical
           protein F55C5.9 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = -2

Query: 109 VVIYIKLFIIT*NVF--LKFYIIVSTIINIYT 20
           +++ I LF I  N+F   K+Y+I  TIIN+ T
Sbjct: 30  LIVIIALFKIKSNIFQTYKYYLIWHTIINVLT 61


>AL021503-3|CAA16423.1|  324|Caenorhabditis elegans Hypothetical
           protein Y68A4A.6 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = -1

Query: 311 HKYLVFHSSH*LCLSLIELHFLFVGDWLDLSLIY*KDL*FLVAIDLSDGIMFPYW*CIFL 132
           H Y+ F S   L   LI L FLF        +++ K   FL+A+ + D +  P    I L
Sbjct: 227 HNYIFFQSFLLLLFRLISLPFLF------QLVVFDKLGTFLMAMTIVDVVTTPL--IIQL 278

Query: 131 NRISNNFSG--HLY*IIHNHVKCFLKVLYYRINDN 33
           + +  N     HLY     H   FLKVL+ ++N++
Sbjct: 279 SYLKCNVQKVLHLYATFDFH--DFLKVLFGKVNNS 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,906,068
Number of Sequences: 27780
Number of extensions: 219718
Number of successful extensions: 638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)