Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322G02f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.62
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 3.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 5.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 7.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 7.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 7.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 7.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 7.7
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.62
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 134 LNRISNNFSGHLY*IIHNHVKCFLKVLYYRIN 39
++ +SNN++ Y +N+ + K LYY IN
Sbjct: 82 ISSLSNNYNYSNYNNYNNNYNNYNKKLYYNIN 113
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -2
Query: 277 CVYL*LNCIFYLLVIGWI--SL*FIKKI 200
C++ LN I Y + GWI F+KK+
Sbjct: 149 CLFSFLNTIVYCVPAGWIWGDQGFLKKL 176
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 92 FNINDH*NYLKSYLKKYITNMETL 163
+N N++ K Y K YI N+E +
Sbjct: 104 YNYNNNNYNKKLYYKNYIINIEQI 127
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 293 EKLDIYVFKTPINQRSMAKMRVDQLKY 373
E + Y + + NQR+M K+ + +KY
Sbjct: 659 ENIFKYGYVSHANQRNMYKLDLKNMKY 685
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 89 IHNHVKCFLKVLYYRIN 39
IHN+ + K+ YY IN
Sbjct: 90 IHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 89 IHNHVKCFLKVLYYRIN 39
IHN+ + K+ YY IN
Sbjct: 90 IHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 89 IHNHVKCFLKVLYYRIN 39
IHN+ + K+ YY IN
Sbjct: 90 IHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 89 IHNHVKCFLKVLYYRIN 39
IHN+ + K+ YY IN
Sbjct: 90 IHNNNNNYKKLQYYNIN 106
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 330 IKGLWLK*EWTS*SMITN 383
I LWLK EW +M N
Sbjct: 71 ITNLWLKLEWNDVNMRWN 88
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -2
Query: 157 FHIGNVFF*IGFQIISVVIYIKLFIIT*NVFLKFYIIVSTIINI 26
F I +F IG+ + + ++ I + FY++VS I++
Sbjct: 91 FKIAPIFKGIGYATCVLSCWTNIYYIIILAWALFYLLVSLRIDL 134
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -2
Query: 157 FHIGNVFF*IGFQIISVVIYIKLFIIT*NVFLKFYIIVSTIINI 26
F I +F IG+ + + ++ I + FY++VS I++
Sbjct: 144 FKIAPIFKGIGYATCVLSCWTNIYYIIILAWALFYLLVSLRIDL 187
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 89 IHNHVKCFLKVLYYRIN 39
IHN+ + K+ YY IN
Sbjct: 323 IHNNNNNYKKLQYYNIN 339
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,695
Number of Sequences: 438
Number of extensions: 2823
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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