Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322G01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141...    55   3e-08
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266...    31   0.56 
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907...    30   1.3  
01_01_0870 - 6789903-6792251                                           29   2.3  
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310...    28   5.2  
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010...    27   6.9  
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367...    27   6.9  
02_02_0487 - 10860693-10861931                                         27   6.9  

>05_01_0195 -
           1409820-1409966,1410304-1410360,1410774-1410828,
           1410902-1411002,1411051-1411205,1411395-1411459,
           1411545-1411595,1411817-1411893,1412153-1412262,
           1412355-1412403,1412528-1412572,1412689-1412813,
           1413087-1413228,1413336-1413446
          Length = 429

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +2

Query: 47  TFLSHQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKE 205
           T ++ Q IQ LGG GY+++ P  R  RDA++ EI  GTSEI+R++I  +L KE
Sbjct: 376 TQVALQAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGTSEIRRMIIGRELFKE 428


>06_02_0283 +
           13726047-13726090,13726160-13726266,13726515-13726621,
           13726735-13726812,13734948-13735071,13735585-13735658,
           13735742-13735801,13737561-13737670,13737806-13737965,
           13738218-13738360,13738461-13738605,13738727-13738819,
           13740070-13740186
          Length = 453

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 71  QILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIA 187
           ++LGG G V+D    + + D      YEG+ E+  L++A
Sbjct: 400 ELLGGNGIVTDFHVGKAFCDMESLYTYEGSYEVNALIVA 438


>06_02_0285 +
           13789900-13790071,13790407-13790525,13790642-13790751,
           13790887-13791046,13791407-13791483,13792299-13792470,
           13792580-13792672,13793617-13793733
          Length = 339

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 71  QILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQL 196
           ++LGG G V+D    + + D      YEG+ E+  LV A ++
Sbjct: 286 ELLGGNGIVTDFHVGKAFCDMESIYTYEGSYEVNVLVAAREI 327


>01_01_0870 - 6789903-6792251
          Length = 782

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 10  GSNGQVGCIRGCYVFITPMYPDSWRNGLCIRYASRT 117
           G  G   C+ G     TP YPD WR G  +   SR+
Sbjct: 290 GGGGGCECVDG----FTPSYPDEWRLGYFVTGCSRS 321


>01_01_0413 -
           3107668-3107796,3107879-3107971,3108082-3108253,
           3108341-3108417,3108514-3108673,3108766-3108875,
           3109384-3109443,3109545-3109618,3109748-3109871,
           3110795-3110872,3111169-3111275,3112572-3112673,
           3112800-3112815
          Length = 433

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 71  QILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQL 196
           ++LGG G ++D    + + D      YEGT +I  LV   ++
Sbjct: 376 ELLGGNGILADFLVAKAFCDLEPIYSYEGTYDINSLVTGREI 417


>11_06_0340 -
           22500411-22500566,22500660-22500783,22500914-22501080,
           22501157-22501336,22501544-22502427,22502728-22502843,
           22503745-22504217
          Length = 699

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 65  CIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
           C +  GG GY +         D  I + +EG + +    +AG L+K+Y
Sbjct: 453 CRESCGGHGYAAVNRFGALRNDHDIFQTFEGDNTVLLQQVAGDLLKQY 500


>05_01_0464 -
           3670397-3670525,3671152-3671244,3671366-3671537,
           3671626-3671702,3671819-3671978,3672104-3672213,
           3672321-3672380,3672492-3672629,3672922-3672999,
           3673227-3673333,3674506-3674598,3674708-3674723
          Length = 410

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 71  QILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQL 196
           ++LGG G ++D    + + D      YEGT +I  LV   ++
Sbjct: 353 ELLGGNGILADFLVAKAFCDLEPIFSYEGTYDINSLVTGREI 394


>02_02_0487 - 10860693-10861931
          Length = 412

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 39  RLLRFYHTNVSRFLEEWVMY-QICQQNDITATLASLRFTRAP 161
           RLL FYHT  +RF +E   +  + Q  ++ A L   R   AP
Sbjct: 70  RLLGFYHTARARFQDEVPAFVPLPQPPELAAALRGARLRLAP 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,442
Number of Sequences: 37544
Number of extensions: 209763
Number of successful extensions: 411
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)