Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322G01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 61 4e-10
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 59 2e-09
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 59 2e-09
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 57 9e-09
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 54 8e-08
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 50 8e-07
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 50 8e-07
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 48 5e-06
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 42 3e-04
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 38 0.004
AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical ... 35 0.031
AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical ... 35 0.031
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 29 1.5
L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of ... 28 4.7
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 6.2
AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 27 6.2
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 61.3 bits (142), Expect = 4e-10
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +2
Query: 47 TFLSHQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
T S QC++ LGG+G+ + PAE+ YRDA I EIYEGTS IQ IA + EY
Sbjct: 370 TSTSAQCVKWLGGVGFTKEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDNEY 423
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEYGLN 217
+QI GG G+ ++ PAE+ RDA+I +IYEGTS+IQR+VIA QL+ N
Sbjct: 360 VQIFGGAGFNTEYPAEKLMRDAKIFQIYEGTSQIQRMVIARQLLARVAQN 409
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
IQILGG GY++D PA R RDA++ EI GTSE++RL+I L KEY
Sbjct: 371 IQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNKEY 417
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
IQILGG GY++D PA R RDA++ EI GTSE++RL+I L KEY
Sbjct: 371 IQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNKEY 417
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEYGLN 217
+QI GG G+ S+ P E+ RDA+I +IYEGTS+IQR+VI+ L+ + N
Sbjct: 363 VQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLLGHFAQN 412
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 71 QILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEYGLN 217
QI GG G+ + P E+ RDA+I +IYEGTS+IQR+VI L + + N
Sbjct: 358 QIFGGAGFNCEYPVEKLMRDAKIYQIYEGTSQIQRMVIGRTLFQNFAKN 406
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 47 TFLSHQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
T + +C++ LGG+G+ + P E+ YRD++I IYEGTS IQ IA + EY
Sbjct: 362 TTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVDIEY 415
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 50.4 bits (115), Expect = 8e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 62 QCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
QCI+ LGG+G+ + AE+ YRDA + IYEGTS IQ IA + E+
Sbjct: 168 QCIEWLGGVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFIDNEF 216
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 50.4 bits (115), Expect = 8e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 62 QCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEY 208
QCI+ LGG+G+ + AE+ YRDA + IYEGTS IQ IA + E+
Sbjct: 255 QCIEWLGGVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFIDNEF 303
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 47.6 bits (108), Expect = 5e-06
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLI 199
+Q+ GG G++ D P +++ RD R+ +I EGT+E+ RL+I+ L+
Sbjct: 358 LQMFGGYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLISRDLL 401
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIA 187
IQ+ GGMG++ + ER RD RI I+EG +++ RL IA
Sbjct: 402 IQVHGGMGFMRETGLERVLRDLRIFRIFEGANDVLRLFIA 441
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 53 LSHQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVI 184
++ QC+QI GG GY++D R +RD RI I G E+ +I
Sbjct: 353 VTDQCLQIWGGAGYLNDNGISRAFRDFRIFSIGAGCDEVMMQII 396
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 53 LSHQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVI 184
++ QC+Q+ GG GY+++ R +RD R+ I G E+ +I
Sbjct: 387 ITDQCLQVWGGAGYLNENGISRAFRDFRLFSIGAGCDEVMMRII 430
>AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical
protein Y45F3A.3b protein.
Length = 608
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRL 178
I+ GG GY+ D RDA++T I+EGT+ + L
Sbjct: 427 IECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSL 463
>AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical
protein Y45F3A.3a protein.
Length = 617
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 68 IQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRL 178
I+ GG GY+ D RDA++T I+EGT+ + L
Sbjct: 436 IECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSL 472
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 74 ILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQLIKEYGLN 217
+LGG G V + RH + YEGT ++ L++ G+ I GLN
Sbjct: 362 MLGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHALIL-GRAIT--GLN 406
>L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of
potassium channelsprotein 7 protein.
Length = 557
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 83 GMGYVSDMPAERHYRDARITEIYEGTSEIQR 175
G+ Y S ERH D R+TEI EG QR
Sbjct: 49 GVEYDSYEELERHEMDDRVTEIPEGFHRRQR 79
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 134 RITEIYEGTSEIQRLVIAGQLIKEYGLN*KHWPYGLH 244
R+TEI + E RL+I LIK +N PYGLH
Sbjct: 407 RLTEI-DVQVETDRLLIGKLLIKMADINSPTKPYGLH 442
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 134 RITEIYEGTSEIQRLVIAGQLIKEYGLN*KHWPYGLH 244
R+TEI + E RL+I LIK +N PYGLH
Sbjct: 286 RLTEI-DVQVETDRLLIGKLLIKMADINSPTKPYGLH 321
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 134 RITEIYEGTSEIQRLVIAGQLIKEYGLN*KHWPYGLH 244
R+TEI + E RL+I LIK +N PYGLH
Sbjct: 407 RLTEI-DVQVETDRLLIGKLLIKMADINSPTKPYGLH 442
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 134 RITEIYEGTSEIQRLVIAGQLIKEYGLN*KHWPYGLH 244
R+TEI + E RL+I LIK +N PYGLH
Sbjct: 407 RLTEI-DVQVETDRLLIGKLLIKMADINSPTKPYGLH 442
>AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 134 RITEIYEGTSEIQRLVIAGQLIKEYGLN*KHWPYGLH 244
R+TEI + E RL+I LIK +N PYGLH
Sbjct: 286 RLTEI-DVQVETDRLLIGKLLIKMADINSPTKPYGLH 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,547,314
Number of Sequences: 27780
Number of extensions: 190015
Number of successful extensions: 381
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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