Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322F11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070961-1|AAL48583.1|  563|Drosophila melanogaster RE06169p pro...    30   2.2  
AE014297-1184|AAF54546.3|  563|Drosophila melanogaster CG31272-P...    30   2.2  
AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,...    28   6.7  
AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,...    28   6.7  
AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,...    28   6.7  

>AY070961-1|AAL48583.1|  563|Drosophila melanogaster RE06169p
           protein.
          Length = 563

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +2

Query: 65  FGFLCSATFIITIYFTMCNIVDIVMLSTFLT 157
           +G   S TF + +YF++ +++ +++ +TFLT
Sbjct: 451 YGLFLSGTFGLMLYFSVSSLMTLIVSATFLT 481


>AE014297-1184|AAF54546.3|  563|Drosophila melanogaster CG31272-PA
           protein.
          Length = 563

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +2

Query: 65  FGFLCSATFIITIYFTMCNIVDIVMLSTFLT 157
           +G   S TF + +YF++ +++ +++ +TFLT
Sbjct: 451 YGLFLSGTFGLMLYFSVSSLMTLIVSATFLT 481


>AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,
           isoform B protein.
          Length = 1674

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 406 YVRFEAYFFVLIYNVIYF*TVTILFYFLE 492
           Y R+  + F+ I+ ++ F TVT+L Y+ +
Sbjct: 309 YTRYFCHIFLSIWKILLFFTVTLLIYWAQ 337


>AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,
           isoform C protein.
          Length = 1615

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 406 YVRFEAYFFVLIYNVIYF*TVTILFYFLE 492
           Y R+  + F+ I+ ++ F TVT+L Y+ +
Sbjct: 309 YTRYFCHIFLSIWKILLFFTVTLLIYWAQ 337


>AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,
           isoform A protein.
          Length = 1615

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 406 YVRFEAYFFVLIYNVIYF*TVTILFYFLE 492
           Y R+  + F+ I+ ++ F TVT+L Y+ +
Sbjct: 309 YTRYFCHIFLSIWKILLFFTVTLLIYWAQ 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,652,526
Number of Sequences: 53049
Number of extensions: 327137
Number of successful extensions: 1036
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)