Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322F11f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 247 YLVFKCSLVLFVYL*NDRKVYKSE 318
           YL+ +CSL L  YL  D+ + K+E
Sbjct: 149 YLIIECSLNLETYL--DKLIEKNE 170


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 142 KHYNVYNITHCK 107
           KHY VY+   CK
Sbjct: 120 KHYGVYSCEGCK 131


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 151 FNDQTVKFCSKVVKEIYIFLFIGKMIFR 234
           F+D T +F +  V E + +L    +I+R
Sbjct: 463 FDDGTTRFYTACVVEAFDYLHSRNIIYR 490


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 142 KHYNVYNITHCK 107
           KHY VY+   CK
Sbjct: 120 KHYGVYSCEGCK 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,205
Number of Sequences: 438
Number of extensions: 2583
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)