Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322F09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 119 1e-27
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 65 3e-11
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 65 3e-11
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 65 3e-11
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 65 3e-11
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 64 4e-11
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 64 4e-11
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 64 6e-11
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 58 3e-09
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 58 3e-09
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 58 5e-09
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 36 0.013
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 35 0.031
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 35 0.031
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 34 0.071
Z82085-1|CAB04984.1| 245|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z82085-6|CAB04987.1| 259|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82085-2|CAB04982.1| 247|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF099919-5|AAC68804.1| 188|Caenorhabditis elegans Hypothetical ... 27 6.2
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 27 6.2
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 6.2
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 119 bits (286), Expect = 1e-27
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFNNRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSP 333
Y +++ T L+ P F W F QD APAH+ K+ Q W + DFI WP SSP
Sbjct: 284 YLDMLKTELM-PWVKKHFKKTKWTFQQDGAPAHKHKNVQAWCESNFPDFIAFNQWPPSSP 342
Query: 332 DLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKA 162
DLNP+DY +W LE KACSKPH N++SLK SL K ++D++ +RA + PRRL+A
Sbjct: 343 DLNPMDYSVWSVLEAKACSKPHRNIDSLKDSLKKAWDELDINYLRATVDSFPRRLEA 399
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 65.3 bits (152), Expect = 3e-11
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI+ T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 222 YENILETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQS 275
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 276 PDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 334
Query: 155 QNHG 144
+G
Sbjct: 335 DANG 338
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 65.3 bits (152), Expect = 3e-11
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI+ T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 152 YENILETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQS 205
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 206 PDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 264
Query: 155 QNHG 144
+G
Sbjct: 265 DANG 268
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 65.3 bits (152), Expect = 3e-11
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI+ T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 152 YENILETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQS 205
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 206 PDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 264
Query: 155 QNHG 144
+G
Sbjct: 265 DANG 268
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 64.9 bits (151), Expect = 3e-11
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI+ T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 193 YENILETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQS 246
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 247 PDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAFI 305
Query: 155 QNHG 144
+G
Sbjct: 306 DANG 309
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 64.5 bits (150), Expect = 4e-11
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 152 YENIFETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQS 205
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 206 PDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 264
Query: 155 QNHG 144
+G
Sbjct: 265 DANG 268
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 64.5 bits (150), Expect = 4e-11
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 222 YENIFETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQS 275
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 276 PDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 334
Query: 155 QNHG 144
+G
Sbjct: 335 DANG 338
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 64.1 bits (149), Expect = 6e-11
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFN-NRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSS 336
Y+NI T + P + N R +VF QD+ P H + + W R + + DWPS S
Sbjct: 222 YENIFETTMR---PWALQNVGRGFVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQS 275
Query: 335 PDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACI 156
PDLNP+++ +W+ LE + N ++ L I M ++ I PRR +A I
Sbjct: 276 PDLNPIEH-LWEKLERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 334
Query: 155 QNHG 144
+G
Sbjct: 335 DANG 338
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFNNRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSP 333
YQN++ L + H ++ + + F QD+A H + ST+D+ ++I+ + DWP+ SP
Sbjct: 206 YQNVLELELSKYLRH--YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSP 260
Query: 332 DLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKAC 159
DLNP++ +W L A +K +P + SLK ++ I + +++ + RL
Sbjct: 261 DLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEI 319
Query: 158 IQNHG 144
I+ G
Sbjct: 320 IRTQG 324
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFNNRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSP 333
YQN++ L + H ++ + + F QD+A H + ST+D+ ++I+ + DWP+ SP
Sbjct: 206 YQNVLELELSKYLRH--YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSP 260
Query: 332 DLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKAC 159
DLNP++ +W L A +K +P + SLK ++ I + +++ + RL
Sbjct: 261 DLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEI 319
Query: 158 IQNHG 144
I+ G
Sbjct: 320 IRTQG 324
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 57.6 bits (133), Expect = 5e-09
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = -1
Query: 512 YQNIVLTNLVVPVPHTMFNNRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSP 333
YQN++ L + H ++ + + F QD+A H + ST+D+ ++I+ + DWP+ SP
Sbjct: 336 YQNVLELELSKYLRH--YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSP 390
Query: 332 DLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKAC 159
DLNP++ +W L A +K +P + SLK ++ I + +++ + RL
Sbjct: 391 DLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEN 449
Query: 158 IQNHG 144
I+ G
Sbjct: 450 IRTQG 454
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 54.8 bits (126), Expect = 4e-08
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = -1
Query: 443 VFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEE--KACSKP 270
+F QD+A H + ST+D+ ++I+ + DWP+ SPDLNP++ +W L A +K
Sbjct: 39 IFCQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIVYAQNKT 94
Query: 269 HPNLESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACIQNHG 144
+P + SLK ++ I + +++ + RL I+ G
Sbjct: 95 YPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQG 136
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/96 (26%), Positives = 42/96 (43%)
Frame = -1
Query: 431 DSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLES 252
D+A H A T+ L I+ + H P SPDL P DY +++ L+ + + ++
Sbjct: 214 DNARPHTALKTRQKLQTLGIEVLPH---PPYSPDLAPTDYHLFRSLQNHLAGQKFHDRKA 270
Query: 251 LKTSLIKPAADIDMDLVRAAIHDCPRRLKACIQNHG 144
++T L A + I P R + I +G
Sbjct: 271 VETWLDDFFASKSQEFYAEGIAQLPLRWQEVIDTNG 306
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/99 (28%), Positives = 39/99 (39%)
Frame = -1
Query: 440 FXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPN 261
F D+A H AK T L + H P SPDL P DY ++ L + K +
Sbjct: 239 FLHDNARPHVAKKTFQKLQDLGWTVLPH---PPYSPDLAPTDYHLFLSLSDYMRDKQFDD 295
Query: 260 LESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACIQNHG 144
E LKT L + D I P + + + +G
Sbjct: 296 EEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQVVDTNG 334
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/99 (28%), Positives = 39/99 (39%)
Frame = -1
Query: 440 FXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPN 261
F D+A H AK T L + H P SPDL P DY ++ L + K +
Sbjct: 214 FLHDNARPHVAKKTFQKLQDLGWTVLPH---PPYSPDLAPTDYHLFLSLSDYMRDKQFDD 270
Query: 260 LESLKTSLIKPAADIDMDLVRAAIHDCPRRLKACIQNHG 144
E LKT L + D I P + + + +G
Sbjct: 271 EEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQVVDTNG 309
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 33.9 bits (74), Expect = 0.071
Identities = 24/68 (35%), Positives = 30/68 (44%)
Frame = -1
Query: 440 FXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPN 261
F D+A H AK T L + H P SPDL P DY ++ L + K +
Sbjct: 239 FLHDNARPHVAKKTFQKLQDLGWTVLPH---PPYSPDLAPTDYHLFLSLSDYMRDKQFDD 295
Query: 260 LESLKTSL 237
E LKT L
Sbjct: 296 EEHLKTEL 303
>Z82085-1|CAB04984.1| 245|Caenorhabditis elegans Hypothetical
protein ZK218.1 protein.
Length = 245
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 218 IDMDLVRAAIHDCPRRLKACIQN 150
ID DLVRAA+ CP+ C Q+
Sbjct: 92 IDADLVRAAVSTCPKTCGYCCQS 114
>Z82085-6|CAB04987.1| 259|Caenorhabditis elegans Hypothetical
protein ZK218.7 protein.
Length = 259
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 218 IDMDLVRAAIHDCPRRLKACIQN 150
+D DLVRAA+ CP+ C Q+
Sbjct: 96 VDPDLVRAAVSTCPKTCGLCCQS 118
>Z82085-2|CAB04982.1| 247|Caenorhabditis elegans Hypothetical
protein ZK218.3 protein.
Length = 247
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 218 IDMDLVRAAIHDCPRRLKACIQN 150
+D DLVRAA+ CP+ C Q+
Sbjct: 94 VDPDLVRAAVSTCPKTCGFCCQS 116
>AF099919-5|AAC68804.1| 188|Caenorhabditis elegans Hypothetical
protein F40G9.10 protein.
Length = 188
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -1
Query: 464 MFNNRHWVFXQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQH 297
+F NR W + S+ + +W AA E + ++HE W + D+NP +++ H
Sbjct: 119 IFENREWSWTDGSSVNYL-----NW-AAGEPNNMKHELWTALVSDVNPKKGQMYTH 168
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -1
Query: 347 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADID----MDLVRAAIHDC 180
P++SPD + L + + E ++CS P E+L S+ P D +D C
Sbjct: 171 PTTSPDCDELREWLTEEEENESCSSSRP--ENLNASIPAPIPGDDSRPSIDSEENPYTPC 228
Query: 179 PRR 171
PRR
Sbjct: 229 PRR 231
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -1
Query: 347 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKPAADID----MDLVRAAIHDC 180
P++SPD + L + + E ++CS P E+L S+ P D +D C
Sbjct: 171 PTTSPDCDELREWLTEEEENESCSSSRP--ENLNASIPAPIPGDDSRPSIDSEENPYTPC 228
Query: 179 PRR 171
PRR
Sbjct: 229 PRR 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,558,582
Number of Sequences: 27780
Number of extensions: 265650
Number of successful extensions: 683
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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